Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq38901 167 3e-36 seq31271 165 1e-35 seq10399 125 9e-24 seq2466 118 1e-21 seq56161 104 3e-17 seq16111 100 4e-16 seq7901 98.7 1e-15 seq23937 93.3 6e-14 >seq38901 Length=446 Score = 167 bits (184), Expect = 3e-36 Identities = 252/356 (71%), Gaps = 3/356 (1%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 ||||| || || ||||| |||||| ||| ||||||||||||| || || | | | || Sbjct 7 CCCGAGGAGATCTCGTCCATGGTGCTGACCAAGATGAAGGAGATCGCTGAGGCATACCTG 66 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 |||| || || || | || || | || || || || ||||| | ||| || || || Sbjct 67 GGTACGACGGTCAAGAACGCGGTGATCACGGTGCCGGCGTACTTTAATGACTCGCAGCGT 126 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || | ||||| | | || || ||||| ||| || | || ||||| || Sbjct 127 CAGGCTACGAGAGACGCCGGCACGATCGCTGGTCTCAACGTGCTGCGCATCATCAACGAG 186 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || || || ||||| ||||||||| |||| || || ||||| Sbjct 187 CCGACGGCTGCAGCGATCGCGTATGGCTTGGACAAGA--AAGG-CGGCGAGCGCAATGTG 243 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 |||||||||||||||||||||| ||||| || || || | || | || |||| || Sbjct 244 CTGATCTTTGATCTCGGTGGTGGCACGTTCGACGTGTCGTTGCTGACGATCGAAGAGGGC 303 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| || ||||| ||||| || || || ||||| || || ||||| || || Sbjct 304 ATCTTCGAGGTGAAGGCGACTGCGGGCGACACGCATCTCGGCGGCGAAGACTTTGA 359 >seq31271 Length=530 Score = 165 bits (182), Expect = 1e-35 Identities = 322/476 (68%), Gaps = 0/476 (0%) Strand=Plus/Minus Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934 ||||| ||||| ||||| ||||| || ||||| || || || | ||||| | ||||| Sbjct 488 ATCTTCGATCTTGGTGGCGGTACCTTCGATGTGTCGCTCCTGAGCATTGAGGAGGGTATC 429 Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994 || || || |||||||| |||||||| || ||||| |||||||| ||||||||| || Sbjct 428 TTTGAGGTCAAGGCTACGGCTGGTGACACGCATCTTGGTGGTGAGGATTTCGATAACCGC 369 Query 195995 CTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAAT 196054 || || || || | | |||||| || ||| | || || | | | || Sbjct 368 CTCGTCGACCACTTCACGGCCGAGTTCAAGCGCAAGCACCGCAAGGACCTCACGAGCAAC 309 Query 196055 CCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCT 196114 | | ||||| ||||| || | || || || || || || || || || ||||| || Sbjct 308 CAGCGTGCTCTCCGTCGTCTGCGCACGGCCTGCGAGCGCGCTAAGCGCACGCTCTCGTCG 249 Query 196115 ACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACT 196174 |||| || | | |||||||||||| | || || || | |||||| | | || Sbjct 248 TCGGCCCAGGCCTACATCGAGATTGATTCGCTCTTCGATGGTGTCGACTTCAACTCGACC 189 Query 196175 ATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCT 196234 || || ||||| ||||| || || | | | || | || | ||| ||||| ||| Sbjct 188 ATCACGCGTGCTCGTTTCGAGGACCTCTGCGCGGACTACTTCCGCAAGACGATGGAGCCT 129 Query 196235 GTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTT 196294 ||||| | || ||||||||||| ||| | ||| |||| | || | |||||| Sbjct 128 GTTGAGAAGGTGCTTCGTGACGCCAAGCTCTCGAAGAGCCAGGTGCACGAGGTCGTCCTT 69 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAA 196350 || || || || |||||||| |||||| | || ||| | || || ||||||||| Sbjct 68 GTCGGTGGCTCGACCCGTATCCCGAAGGTCCAGCAGCTCCTGTCGGACTTCTTCAA 13 >seq10399 Length=1091 Score = 125 bits (138), Expect = 9e-24 Identities = 579/915 (63%), Gaps = 8/915 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || ||||| ||||| | || || || || |||||||| |||||||| | || || Sbjct 82 ACGGTGCCTGCGTACTTTAACGACTCGCAGCGGCAGGCGACCAAGGACGCGGGCGCCATC 141 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 ||||| || ||| || | || ||||| || || || || || || || || || || Sbjct 142 GCGGGGCTCAACGTGCTGCGGATCATCAACGAGCCGACGGCCGCCGCGATCGCGTACGGC 201 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 || ||| ||||| || || | || || | ||||||||||| || || || ||| Sbjct 202 CTCGACCG---CAAGGGCGGCGAGCACAACGTGCTCATCTTTGATCTGGGCGGCGGCACG 258 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || || || || || || | || || | || || || || || ||||| || || || Sbjct 259 TTCGACGTGTCGCTGCTGACCATCGAGGAAGGCATCTTTGAGGTCAAGGCGACGGCCGGC 318 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGA 196017 | || || | || || || || || || || || || || ||||| | || Sbjct 319 AACACGCACTTGGGCGGCGAGGACTTTGACAACCGCCTCGTCGAGTTCTTTGT-GGCCGA 377 Query 196018 GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAG 196077 |||| || ||| | || || || || || | | || || || ||||| | Sbjct 378 GTTCAAGCGCAAGCACCGCAAGGACATGTCGACGAACCAGCGCGCGCTGCGGCGGCTGCG 437 Query 196078 GACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGAT 196137 || || || || || ||||| || || || || || |||| || | | ||||| Sbjct 438 CACGGCCTGCGAGCGCGCCAAGCGCACGCTGTCATCGTCGGCGCAGGCGTATCTCGAGAT 497 Query 196138 TGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGA 196197 ||| ||| |||||||||| | |||||| | | || || || || || || || || || Sbjct 498 TGACTCGCTGTTTGACGGCGTGGACTTCAACTCGACGATCACGCGCGCGCGGTTCGAGGA 557 Query 196198 GTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGC 196257 | | | || | ||| | || ||| || || || | || || || ||||| Sbjct 558 TCTGTGCGCCGACTACTTTCGCCAGACCATGACGCCAGTGGAGAACGTGCTGCGCGACGC 617 Query 196258 AAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCC 196317 ||| | ||| | || | || | || || || || || || || || || || Sbjct 618 CAAGCTCAGCAAGCGCGACGTGCACGAGGTCGTGCTGGTCGGCGGCTCGACGCGCATCCC 677 Query 196318 GAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAA 196377 ||||| || | |||| || || ||| | || || | |||| ||||||| Sbjct 678 CAAGATCCAGGCGCTGCTCTCCGAGTTTTTCCACGGCAAGGAGCTCTACAAGTCGATCAA 737 Query 196378 CCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGA 196437 ||||| ||||| || || | ||| ||| | || ||| | || ||||| || || | || Sbjct 738 TCCGGACGAAGCCGTGGCGTTTGGCGCGACTGTGCAGTCGGCGATTCTGTCGGGCGCGGA 797 Query 196438 CAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCT 196494 | | | | | || ||||| ||||| || || || | || | || || || || Sbjct 798 CCAGTCGAGTCGGCTGCAGGATCTGCTGCTGCTGGACGTGACGCCGCTGTCGCTTGGGCT 857 Query 196495 TGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAA 196554 || || || || || || ||||| | | |||| | ||||| || | ||||| || Sbjct 858 CGAGACCGCAGGGGGCGTCATGACGACGCTCATTGCGCGCAACACGACGGTGCCGACCAA 917 Query 196555 GAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATA 196614 |||| || || || ||||| | || || || ||||| || | || || || | Sbjct 918 GAAGACGCAGACGTTCTCGACGTACGCGGACAACCAGCCAGGCGTGCTCATCCAGGTCTT 977 Query 196615 TGAAGGAGAACGCTC 196629 ||| || || || || Sbjct 978 TGAGGGCGAGCGGTC 992 >seq2466 Length=2322 Score = 118 bits (130), Expect = 1e-21 Identities = 235/344 (68%), Gaps = 8/344 (2%) Strand=Plus/Minus Query 195647 TCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAA 195706 || |||||| | | |||||||||||||| || || ||| | || || | || | Sbjct 1693 TCCATGGTGCTCACCAAGATGAAGGAGACCGCCGACAGCTTCCTCGGCAAGTCGGTCACG 1634 Query 195707 GATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGAC 195766 | || ||||| || || || || ||||||| || || || || ||||| || |||||| Sbjct 1633 CAGGCCGTTGTCACGGTGCCGGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGAC 1574 Query 195767 GCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGC 195825 |||| ||||| ||||| | ||| || | || ||||| || || || || || || Sbjct 1573 GCTGGCAAGATTGCCGGTCTTGA-TGTGCTCCGTATCATCAACGAGCCGACGGCTGCCGC 1515 Query 195826 AATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCT 195885 | || || ||||| |||||| | | | | ||| | | | |||| ||||| Sbjct 1514 GCTCGCGTACGGTCTCGACAAGGCCGATGGC-AAGGTCA-----TCGCCGTCTTCGATCT 1461 Query 195886 CGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAA 195945 ||||||||||| || |||||||| | ||| | || |||||| | || || || || Sbjct 1460 TGGTGGTGGTACCTTCGATGTCTCGATCCTCGAGATCTCGGGTGGTGTCTTTGAGGTCAA 1401 Query 195946 GGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATG 195989 ||| || ||||| || | || |||||||| |||||||||| Sbjct 1400 GGCCACGAACGGTGACACGCTCCTCGGTGGTGAGGATTTCGATG 1357 >seq56161 Length=323 Score = 104 bits (114), Expect = 3e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 195317 GGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAAT 195376 || || || ||||| || || || || ||||| | || || || ||||| ||| | ||| Sbjct 221 GGCACCACGTACTCGTGCGTGGGCGTGTGGCAGCACGACCGCGTCGAGATCATCGCCAAT 162 Query 195377 GACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTT 195436 ||||| || ||||| || || || || ||||| || || || || | || || || | Sbjct 161 GACCAGGGCAACCGCACGACGCCGTCCTACGTCGCGTTCACCGACACGGAGCGGCTGATC 102 Query 195437 GGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAG 195496 || || ||||| || || ||| || |||||| | || || ||||||||||| ||| Sbjct 101 GGCGACGCCGCCAAGAACCAGGTCGCCATGAACGCGGCGAACACAGTCTTTGACGCCAAG 42 Query 195497 CGTCTTATTGGTCGCAAGTT 195516 || || || || |||||||| Sbjct 41 CGGCTCATCGGGCGCAAGTT 22 >seq16111 Length=839 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 195317 GGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAAT 195376 || || || ||||| || || || || ||||||||||| || || ||||| ||| |||| Sbjct 158 GGCACAACGTACTCGTGCGTCGGCGTGTGGCAAAATGACCGAGTGGAGATCATCGCGAAC 99 Query 195377 GACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTT 195436 ||||| || ||||| || || || |||||||| || ||||| || | || ||||| | Sbjct 98 GACCAGGGCAACCGCACGACGCCGTCGTACGTGGCGTTTACGGACACGGAGCGTCTGATC 39 Query 195437 GGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 || || || ||||| || ||| || |||||| Sbjct 38 GGTGACGCGGCAAAGAACCAGGTCGCGATGAAC 6 >seq7901 Length=1278 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 |||||||||||| | || || || ||||| || || ||||| ||| | | | | || Sbjct 902 ATTGGTATCGATCTTGGTACGACGTACTCGTGCGTCGGTGTCTGGAAGGACGGCCAGGTC 961 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 ||||| || | || | | || ||||| || || || |||| || ||||| | || Sbjct 962 GAGATCATTGCCAACAGCGAGGGTAACCGCACGACGCCGTCGTGGGTCGCCTTCAACGAG 1021 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | || |||||| | || || ||||| || | ||| | || |||||| || || Sbjct 1022 ACGGAGCGTCTCATCGGTGAGGCCGCCAAGATCCAGGCCGCGTCGAACCCGTCGAACACG 1081 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 |||||||| || |||||| | ||||||||||| || ||||| ||| || ||||| Sbjct 1082 GTCTTTGATGCCAAGCGTATCATTGGTCGCAACTTCTCGGACGAGATCGT-CAAGA 1136 >seq23937 Length=647 Score = 93.3 bits (102), Expect = 6e-14 Identities = 356/553 (64%), Gaps = 7/553 (1%) Strand=Plus/Minus Query 196289 GTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTC 196348 ||| | ||||| || || || || || || ||| | || ||| |||| || ||||||| Sbjct 551 GTCTTGGTGGGTGGCTCGACGCGCATCCCCAAGGTGCAGCAGCTGCTGTCGGACTTCTTC 492 Query 196349 AATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCC 196408 || ||||| ||| ||||||| || || || || || || | ||| || ||| Sbjct 491 AACGGCAAAGAGCCGTGCAAGTCGATCAATCCAGACGAGGCCGTGGCGTTTGGCGCCGCC 432 Query 196409 GTTCAGGCTGCTATTCTCTCAGGTGTTGACAA-TAAT--AACGTCCAAGATCTTCTGCTA 196465 || || || || || | | || | ||||| | | || | || ||||| || | Sbjct 431 GTGCAAGCAGCGATCTTGACGGGCGAGGACAAGTCGTCCAAGCTGCAGGATCTGTTGTTG 372 Query 196466 CTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATT 196525 || ||||| | || | || ||||| || || || ||||||||||| ||||| | | Sbjct 371 CTGGATGTGACGCCGCTGTCGCTGGGACTCGAGACCGCGGGTGGTGTGATGACGACGCTG 312 Query 196526 ATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGAT 196585 || | ||||| | | ||||| |||||| || || || |||||| | || Sbjct 311 ATCCCGCGCAACACTGCGGTGCCGACGAAGAAGTCGCAGACATTCTCGACGTATGCAGAC 252 Query 196586 AATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAAC 196645 ||||| || || || | || ||||| | ||| || || || || | ||||| ||| Sbjct 251 AATCAGCCGGGCGTCCTGATCCAAGTGTTTGAGGGCGAGCGATCGATGACCAAGGACAAC 192 Query 196646 CATCTACTTGG-AACTTTCGATTTGACGGGGATTCCAGCTGCACCCA-GAGGTGTTCCAC 196703 |||| || || || ||| | | ||| || ||| || | ||| | || || Sbjct 191 AATCTGCTGGGCAAGTTTAGTCTGGAC--GGCATCCCGCCGATGCCACGCGGCAAGCCGG 134 Query 196704 AGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACA 196763 |||| | || ||||| || ||||| || || ||||| ||||| | || | ||| | Sbjct 133 AGATCGAGGTGACGTTCGACATCGACGCCAACGGCATTCTGAACGTGTCGGCGGTGGAGA 74 Query 196764 AGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGG 196823 || | | ||||| | ||||| ||| || || |||||||| || || || ||| Sbjct 73 AGTCGACGGGCAAGGACAACAAGATCACGATCACGAACGACAAGGGTCGACTGTCGCAGG 14 Query 196824 AGGAAATTGAACG 196836 || || || || Sbjct 13 CAGAGATCGACCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657364052785440