Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq22000 132 1e-25 seq12203 100 8e-16 seq2270 87.8 5e-12 >seq22000 Length=686 Score = 132 bits (146), Expect = 1e-25 Identities = 261/383 (68%), Gaps = 6/383 (2%) Strand=Plus/Minus Query 302487 TGGGTCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTAC 302546 || ||| || || || || || || | |||||||||| | | || ||| | || Sbjct 678 TGCGTCCATGCCATCTTCACCATACAAGAACTGAATGATCTCGCCCTGAGCATTGCGGAC 619 Query 302547 GGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATA 302606 ||| ||| |||| | |||| | |||||| |||| | |||||||||||| || Sbjct 618 GGTACCATCGTAACGAGTCATCACCGACTCCATAGCTTTGACAAGACGACGCTGAATGTA 559 Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 ||| ||| || || || || || |||||||| | ||| ||||||||||||| || || Sbjct 558 ACCCGTTTCAGCGGTCTTGACGGCGGTATCAATCAAACCTTCACGACCACCCATGGCGTG 499 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | ||||| ||| || ||| | | ||| | || ||||||||||| Sbjct 498 GAAGAAGAACTCTTGCGGGGTTAAACCCTTCAAGTACGAGTTTTCGACGAAACCACGACT 439 Query 302727 CTCGGG-CGA--ATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTA 302783 |||||| | | ||| || ||| |||| || || || || | |||| || Sbjct 438 CTCGGGACCAAGATCATC---CTTTCCGTAGTGGGGAAGAGTTCTTCGGTTGAAGCCATA 382 Query 302784 TGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || ||||||||||| || ||||||||||| |||| |||| ||| ||||| || || || Sbjct 381 CGGAATACGCTTTCCTTCGACGTTCTGCTGACCCACACACGCAATAATCTGGGAGATGTT 322 Query 302844 TAAATCACTGCCCTTGGAGCCAG 302866 | | ||||||||||||| Sbjct 321 GATGTACGATCCCTTGGAGCCAG 299 >seq12203 Length=990 Score = 100 bits (110), Expect = 8e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 ||||| || |||| ||| ||||||||||| || || | ||| |||||||| || || || Sbjct 434 CCGTGCGAGATCAGACAGTCACGCTCCATCTCTCCCATACGCAGACCACCTTCTCGCGCA 493 Query 251548 CTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGC 251607 | |||||| ||||| || || || | || || ||| ||||| || | Sbjct 494 CGACCCTCCATGGGCTGGCGCGTCAGCATCGTCACGGGGCCGCGCGAGCGCGAGTGGATC 553 Query 251608 TTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 || || | |||||||||||||||||||||||||| | || ||||||||||| Sbjct 554 TTGTCGTCGACCATATGCTTGAGACGCTGGTAGAACGTCGGGCCGATGAAGAT 606 >seq2270 Length=2410 Score = 87.8 bits (96), Expect = 5e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 354016 GCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACG 354075 ||||| |||||||||| | ||||||||| | || || |||||||| || | || | | Sbjct 2015 GCGAGCGCACCAAGCGCCGCGCGGTCGAGGTAGTTGGTCGGTTCGTCGAGCACGAGCAGG 1956 Query 354076 TGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAGT 354135 ||||| || |||||| || || || | || | ||| |||||||||||||| || || Sbjct 1955 TGCGGACGCACCCACATCGCGGCCGCGATCACGAGCTTGACCTTCTGTCCGCCCGAGAGC 1896 Query 354136 GCGTGAATCTTGGAATATGTACCGAACT 354163 || | |||||| || || || |||| Sbjct 1895 CCGCGGATCTTGCCGTACGTGCCAAACT 1868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470674787906874