Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4160 208 7e-49 >seq4160 Length=1787 Score = 208 bits (230), Expect = 7e-49 Identities = 954/1482 (64%), Gaps = 66/1482 (4%) Strand=Plus/Plus Query 138540 GTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGT 138599 ||| |||||| | ||||| ||||| | ||| |||||||| || || ||||| || || | Sbjct 195 GTACATGTTGGTCGTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCAGTCGA 254 Query 138600 CGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTC 138659 ||| |||||||| ||| | || || || || || | |||| || || | | Sbjct 255 CGCCGTCGGCATCGGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGACGCTCGC 314 Query 138660 CTTGAGCGACGACCAGTCCCACAAATCGC---TAGGTTTTTTGTTCCACATATCGTACTG 138716 |||||||| | ||||||||| | | | | || | | |||||| ||| |||| Sbjct 315 CTTGAGCGCGGCCCAGTCCCAGAGACCCGACGTCGGCGTGACGCCCCACATGTCGAACTG 374 Query 138717 TAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGC 138776 || || ||| || |||| || ||||| |||| || ||| |||| Sbjct 375 GAAGATGCCCTTGCTCACGGGCGAACCCTCGTAGCTGCCGTACGGGCCGTGCTCCCGCGC 434 Query 138777 CAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAG 138836 | ||| | ||||| | || ||| |||| | || ||| || | || ||||| Sbjct 435 GAGCTCCATCGAGGCCTCCATGGCGCCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAG 494 Query 138837 CAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCC 138896 | ||||||||| |||||||| ||| || | | |||||||||| || || || Sbjct 495 CTCGCGGGCCTCGTCGCTCTCGAACGCGTAGCCCATGAGGATGAACGCGTCCGCGAGACC 554 Query 138897 TTGCACGCCCACTCCGACAGGGCGATGGCGCAGATT--TGACGCTTTTGCGGCTTCG--- 138951 |||||||| | |||| ||||| |||||||| || || |||| |||| ||| Sbjct 555 CTGCACGCCGATGCCGATCGGGCGGTGGCGCAGGTTGCTG-CGCT----CGGCCTCGGGG 609 Query 138952 ATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTA 139011 || || || ||||| | ||||||| ||||| | || ||| ||| ||||| || | Sbjct 610 ATCGGGTAGTAGTTGATGTCGATGACCTTGTTCAGGTTGCGCGTGACGACCTTGGTGATG 669 Query 139012 TGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTT 139070 | | | | | | | || || | || ||||||||| ||| ||||| || Sbjct 670 T-CGTAGAGCTTCTGGAAGTCAAAGGTC------TTGTCGTCG-----GTC-ACAAACTT 716 Query 139071 GTTGACACAA--ATCGAGGCTATGTTGCACACCGCCACTTCGTCGGG-GTCGCTGTATTC 139127 | |||| || || || | |||||||||||| || || ||||| | || |||| || Sbjct 717 G--GACAGCGCGATGGACGCGAGGTTGCACACCGCGACCTCATCGGGCGACG-TGTACTC 773 Query 139128 GACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTT 139187 || | ||| || | || || | |||||| || | || || || || || Sbjct 774 GAGCACCTCGCAGCAGAGGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTT 833 Query 139188 TCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTAT 139247 ||||| || | || ||||| ||||| ||||| ||||| || || | || | ||| | Sbjct 834 GCGGTTGCACGAGTCCTTGTACAGCATGTACGGCGTGCCTGTCTCGATCTGCGACTCGAG 893 Query 139248 AATGAATTTGAACAAGTCC--CTA-GCTTGTAT----TTGACGCACGTAAAGTTCGTCGC 139300 || |||| || | || || | || ||| ||| || | | |||| Sbjct 894 GATCGC---GAACCAGAGCTGCTGCGCGCGGATCGTCTTG-CGCGCGC---GGCCCTCGC 946 Query 139301 GCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGC-- 139357 ||||||||| | ||| || | ||||| |||| | || | |||| ||| | | Sbjct 947 GCTCGTACTGGTGGTACAGCGCCTCGAACTCGT-CGCCCCA--CGTCGTGTAGAGCCCCG 1003 Query 139358 GACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACA 139417 | || || || || | || ||| ||||||| |||| ||||||| ||||||| | Sbjct 1004 GCGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCGTTGGCCTCGACGCGCTTCATGAAGA 1063 Query 139418 GATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTT-ATCTTCCGAACCCATG 139476 |||| || ||||||| ||| | | | ||| ||||| | | || || || || Sbjct 1064 GATCGGGGATCCACATCGCGTAGAAGAGATCACGCGCGCGGTGCAGCT--CGTTGCCGTG 1121 Query 139477 TTACGT-TTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGC 139535 | | | || | || ||||| || || | ||| |||||||| || ||||| || || || Sbjct 1122 GTTCTTCTTGAGGTCCAGGAACTCGAAGATGTCGGCGTGCCACGGCTCCAGGTACATCGC 1181 Query 139536 CATTGCGCCTTTCCGTTTGCCACCT---TGATCGACGTGTCGTACAGCATTATTGAATAC 139592 | | ||| || || ||||| || || ||||||| || | | | ||||| || Sbjct 1182 GAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCCGTGTCGTTGAAGAC 1241 Query 139593 GCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCG 139652 |||| ||| ||| | || ||| ||| | ||||| |||| |||||| |||| Sbjct 1242 ACGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTTCGTGCCGCGGATGTACGAGTTGGT 1301 Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712 || |||| || || || ||| |||||| ||||| | | ||||| || | |||| Sbjct 1302 CGCGCGGATGTTGTGCACGCTGACGCCGATGCCGCCAGCCCACTTGGAGATGCACGCGCA 1361 Query 139713 ATCGCGTAAT-GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGC 139771 | || | | || ||||| || || || |||||||| ||| | || ||| |||| Sbjct 1362 CT-GCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGC 1420 Query 139772 ATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGA 139831 | ||||| || ||||| | |||||| || ||||| || || |||||||||||| Sbjct 1421 ACGACGACAGCTGCGGGCGCGGCGTGCCCGCGTTGAACAGCGTCGGCGTCGCGTGCGTGA 1480 Query 139832 ACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATC--CCTTCCGTG 139889 | | || |||||| | |||||||| |||| ||| |||| || ||| ||| Sbjct 1481 AGAAGCTTTGCGACATGTACTCGTACGTCTCGAGCGCGGCGTCAATGTCGTGCTT--GTG 1538 Query 139890 GATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAt 139949 ||| ||||| | ||| |||| | ||| || || || || || ||| ||| ||| Sbjct 1539 GATGCCGACGGCGACACGCAGAATCATCTGCTGCGGACGCTCCGCGACCTTGCCGCCGAC 1598 Query 139950 ttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTA 139991 ||||| ||||| || |||||| |||||||||| Sbjct 1599 GCGGAGGAGATACGACTTCTCGAGCGTCTTGAAGCCAAAGTA 1640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449556791320560