Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4160 260 1e-64 >seq4160 Length=1787 Score = 260 bits (288), Expect = 1e-64 Identities = 993/1525 (65%), Gaps = 63/1525 (4%) Strand=Plus/Plus Query 146905 AACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCA 146964 |||||||| || ||||| || | | |||| ||| | ||||| ||||| | ||||| Sbjct 169 AACTCGCCAGCGAGCACGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCGATCGACTCG 228 Query 146965 TTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTT 147024 || ||||| | || || || || | || || ||||| ||| | || || || || Sbjct 229 TTGTTGCCGAGGATCTGCGCAGTCGACGCCGTCGGCATCGGCGCGAGCAGCAGCGAGTTG 288 Query 147025 CGCAGACCGTAC-GCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACAT---CGACGA 147080 |||| |||||| || || | | | |||| | | ||||||||| | ||||| Sbjct 289 CGCACGCCGTACTGCGCG-ACGCTCGCCTTGAGCGCGGCCCAGTCCCAGAGACCCGACGT 347 Query 147081 GGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAA 147140 ||||| ||| |||||||||| |||||| | || || |||| |||| Sbjct 348 CGGCGTGACGCCCCACATGTCGAACTGGAAGATGCCCTTGCTCACGGG--------CGAA 399 Query 147141 CGTAGTGTAGCTTCCGT------CGCGCT---GCGCCAATTCACAGCTTG-CCTCGAGCG 147190 | |||||| |||| || ||| |||| | || || | | |||| | | Sbjct 400 CCCTC-GTAGCTGCCGTACGGGCCGTGCTCCCGCGCGAGCTC-CATCGAGGCCTCCATGG 457 Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250 | ||| |||| | || ||| ||| | ||||| || || || || ||||||||| Sbjct 458 CGCCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCTCGCGGGCCTCGTCGCTCTCG- 516 Query 147251 AAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 || || || | || || | || || || || | |||||| | |||| |||||| || Sbjct 517 AACGCGTAGCCCATGAGGATGAACGCGTCCGCGAGACCCTGCACGCCGATGCCGATCGGG 576 Query 147310 CGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATAAT 147368 || || |||||||||| ||| ||| | || || |||| |||| || || | Sbjct 577 CGGTGGCGCAGGTTGCTGCGC-TCGGCCTCGGGGATCGGGTAGTAGTTGATGTCGATGAC 635 Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428 |||||| ||||| ||| || || || || || | ||| |||| ||| ||| | || Sbjct 636 CTTGTTCAGGTTGCGCGTGACGACCTTGGTGATGTCGTAGAGCTTCTGGAAGTCAAAGGT 695 Query 147429 CCCGTCTTC-GACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCG 147487 | ||| || | ||| || |||| || ||||| ||||| || ||||| || || Sbjct 696 CTTGTCGTCGGTCACAAAC---TTGG-ACAGCGCGATGGACGCGAGGTTGCACACCGCGA 751 Query 147488 TCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACT 147546 ||| || |||| || |||||| | | ||| ||| |||||||| | || Sbjct 752 CCTCATCGGGCGACG-TGTACTCGAGCACCTCGCAGCAGAGGTTGCTCGAGCGGATCGTG 810 Query 147547 CCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 147606 || | || ||||| || || || ||||||| ||| ||| | ||||||||||| | Sbjct 811 CCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGTCCTTGTACAGCATGTACGGCGTG 870 Query 147607 CCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGC 147663 || ||||||| |||| || | ||| |||| || | |||||| || | | | Sbjct 871 CCTGTCTCGATCTGCGACTCGAGGATCGCGAACC---AGAGCTGCTGCGCGCGGATCGTC 927 Query 147664 TGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAG 147723 | || |||||||||| |||||| | | ||||| | ||| ||||||||||| | Sbjct 928 TTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAACTCGTCGCCCCA- 986 Query 147724 CAATCG-GCA-AGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGT 147781 ||| | | || || || || | ||| || | ||| |||| | ||| || | Sbjct 987 -CGTCGTGTAGAGCCCCGGCGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCGTTGGCCT 1045 Query 147782 TAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGAT--CGCGCGCTTT 147839 ||||| ||| || ||||| || | ||||| |||||| | |||| ||||||| | Sbjct 1046 CGACGCGCTTCATGAAGAGATCGGGGATCCACATCGCGTAGAAGAGATCACGCGCGCGGT 1105 Query 147840 GCAATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTCGGCGTGCC 147898 ||| |||| ||| ||| || | | | | || | | ||||||||||||||| Sbjct 1106 GCA--GCTCGTTGCCGTGGTTCTTCTTGAGGTCCAGGAACTCGA-AGATGTCGGCGTGCC 1162 Query 147899 AGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTT---TCCGCCCTGGTCGACATGGC 147955 | || || | ||| | || | || || || ||||| |||||||||||||| | || Sbjct 1163 ACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCGACGTAGC 1222 Query 147956 GCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGG 148015 || || ||| ||| || || |||| |||||| | |||||| ||| | |||||| ||| Sbjct 1223 GCGCCGTGTCGTTGAAGACACGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTTCGTGC 1282 Query 148016 AATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGT 148075 ||| | | | || || | | ||||||| | ||||| |||||||| | Sbjct 1283 CGCGGATGTACGAGTTGGTCGCGCGGATGTTGTGCACGCTGACGCCGATGCCGCCAGCCC 1342 Query 148076 ACTTTGATATGGCAGCGCAATCGCCCAA---TGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 |||| || ||| ||||| | || | |||| ||||||||| ||||| ||||| Sbjct 1343 ACTTGGAGATGCACGCGCACT-GCTTGAGCGTGTC--GTAGATGCCCTCGATCGAGTCGT 1399 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | | |||| || ||||| ||| ||||| | |||| ||||| ||| | Sbjct 1400 CCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCCGCGTTGAACA 1459 Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCAT-CATGCGATACGTCTCAATAGCG 148251 | || || |||||||||| || || |||| ||| | || |||||||| | ||| Sbjct 1460 GCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCG-TACGTCTCGAGCGCG 1518 Query 148252 TCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGT 148311 | || ||||||| ||| ||||| | ||||| |||| | ||| ||||| || || Sbjct 1519 GCGTCAATGTCGTGCTTGTGGATGCCGACGGCGACACGCAGAATCATCTGCTGCGGACGC 1578 Query 148312 TCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAG 148371 || || || | | || ||| ||||| || ||||| || ||| | |||||| Sbjct 1579 TCCGCGACCTTGCCGCCGACGCGGAGGAGATACGACTTCTCGAGCGTCTTGAAGCCAAAG 1638 Query 148372 TACTTGTAATCAAAATCTAGCTCGT 148396 || | ||| ||||| || | |||| Sbjct 1639 TAGTCGTACTCAAAGTCGCGGTCGT 1663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476250155100720