Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7871 100 4e-16 >seq7871 Length=1281 Score = 100 bits (110), Expect = 4e-16 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || |||||||| || || ||||||||||| | || | ||||| || || |||| Sbjct 930 CACGCGAAGTCGCAGTGGAGGCCCTCATCGCGCGAGATGAGCTCGTTCGAGAAGCTGAGG 871 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGAA 39735 |||||||| ||||||||||| |||||||| || |||| |||| || || || || ||||| Sbjct 870 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGG-AGCAGAACGAGCCCGAGAAGAA 812 Query 39736 GATGCCTTCTACTGCTGCAAATGCAAC 39762 ||| || || || || || || ||||| Sbjct 811 GATACCCTCGACAGCAGCGAACGCAAC 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686388449411280