Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq4160 114 4e-20 >seq4160 Length=1787 Score = 114 bits (126), Expect = 4e-20 Identities = 364/547 (67%), Gaps = 28/547 (5%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | ||||| |||||| || ||| ||||||||||| || || |||||||| ||| Sbjct 1253 CCCATGCTGCGTGTCTTCAACGACACGGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGC 1194 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || ||||| | || ||||||||||||||||||||||||| | || || ||| Sbjct 1193 AAGGGCTCGTTCGCGATGTACCTGGAGCCGTGGCACGCCGACA-TCTTCG--AGTTCCTG 1137 Query 255101 CTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTC 255157 | | |||| ||||| |||| || ||| || || ||| | ||| | Sbjct 1136 GACCTCAAGAAGAACCACGGCAACGAGCTGCACCGCGCGCGTGATCTCTTCTACGCGATG 1077 Query 255158 TGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGA--GACGAGACCTGGAGCCTCATG 255214 ||| | |||||| || ||| ||||| || | | | |||| |||||||| | Sbjct 1076 TGGATCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGCGAG---TGGAGCCTGTTC 1020 Query 255215 TGTCCCAACTTATCGCCCGG--TCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGT 255272 || || ||| |||| || |||| ||| | ||||| |||||||| || |||| Sbjct 1019 TGCCCGAACGAGGCGCCGGGGCTCTACACGA--CGTGGGGCGACGAGTTCGAGGCGCTGT 962 Query 255273 ATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGG 255331 | | |||||||||| | ||||| | || | | | | | | |||| || || ||||| Sbjct 961 ACCACCAGTACGAGCGCGAGGGCCGCGCGCGCAAGACGA-TCCGCGCGCAGCAGCTCTGG 903 Query 255332 AACACGATGGTGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGAC-C 255389 | |||| | || | |||| | || || || | ||||| | | || |||| ||| | Sbjct 902 TTCGCGATCCT-CGAGTCGCAGATCGAGACAGGCACGCCGTACATGCTGTACAAGGACTC 844 Query 255390 ACATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCG---AACCTGT 255446 || |||| ||||||||| | ||| ||| ||||| | ||||| ||||| | Sbjct 843 GTGCAACCGCA-AGTCGAACCAGCAGAACCTCGGCACGAT---CCGCTCGAGCAACCTCT 788 Query 255447 GCACCGAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTCCA 255506 || |||| | | ||||||| | | ||||| || || |||||| | ||||||| Sbjct 787 GCTGCGAGGTGCTCGAGTACACGTCGCCCGATGAGGTCGCGGTGTGCAACCTCGCGTCCA 728 Query 255507 TCTCGCT 255513 || |||| Sbjct 727 TCGCGCT 721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587102715665890