Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq69 104 2e-17 >seq69 Length=49210 Score = 104 bits (114), Expect = 2e-17 Identities = 382/585 (65%), Gaps = 15/585 (3%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || |||||||||||||| || || || ||||| | ||| || ||||| || || | Sbjct 8483 AGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATCAGCTCGTTCGAGAAGCTG 8542 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | || ||||| || || ||||| | |||||| || | |||| || || ||||| || Sbjct 8543 AGGCCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATAG-AGCAGAACGAGCCCGAGAA 8601 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCAT--CTTTA 16375 ||| || |||||||||| || || |||| | || || ||| ||| || | | Sbjct 8602 GAAGATGCCCTCAACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGGCGCGA 8661 Query 16376 TTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATG 16435 | || | ||| || | |||| | || || | | | || ||||| || ||| Sbjct 8662 GT-CGCA-CCACTTAAGCGCCCAGTGCGCCTTCTTCTGCACGCAGGGGATCGTCTCGATG 8719 Query 16436 GC-CTTAAACAATTTCTCTTTTTCCTGAATA-TCGATTATATACGTATCAATCAGTAAAC 16493 || | | | | |||| | | | | || | || ||||| || || || | Sbjct 8720 GCGCGGAGAAGGTGGTTCTTCT--CGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGCG 8777 Query 16494 TGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCT 16553 ||||| || ||||| |||||||| || || ||||| || ||||||||||| || |||| Sbjct 8778 AGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCATAGAAGCAACGCGCCT 8837 Query 16554 CCGCTATTTGTACTTCCACGTAAAATCGTTC--CGCCAGGTTCTCATTCACGATACCGTC 16611 | | | || || || | || |||| ||| |||||||| || ||||| || || Sbjct 8838 CAGGAACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCATC 8895 Query 16612 ACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAAT 16671 ||| || || || ||||| | | |||||| ||||| || |||| || || | Sbjct 8896 ACTGGCCGCGAAGAACGCGAGCACGTGCTTGATGAAGTAGCGCTCGTTGTCCGTGAGGTT 8955 Query 16672 ATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCAC 16731 | ||| || || | || | | | || | ||||| | |||||| ||||| ||| | Sbjct 8956 GTTCCAGTCCTTGAGGTCGTGGACGAGGTCGATCTCTTCAGCCGTCCAGAAGCTCGCCTC 9015 Query 16732 TGCCTTTTTATACATTTTCCAAATATCATTGTATTGTAT-GGGAA 16775 ||||| || ||||| | ||| | ||||| | || || ||||| Sbjct 9016 GGCCTTCTTGTACATCTGCCAGACCTCATTCTCCTGGATCGGGAA 9060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511330911599200