Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq513 241 2e-58 >seq513 Length=15584 Score = 241 bits (266), Expect = 2e-58 Identities = 442/637 (69%), Gaps = 8/637 (1%) Strand=Plus/Minus Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCAC 145694 |||| | ||| | || || | ||| ||| | | | ||||| | ||| || || ||||| Sbjct 4434 GATCTTAAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGCACCTTAAGCGGTTCCAC 4375 Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCC 145754 ||||| | ||||| |||||| || || | ||||||||| || || | | || ||| Sbjct 4374 ATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAATCTCCAG-CACGCAGCC 4316 Query 145755 C-GTGAGGTGGGCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812 | |||| || |||| | || | |||| ||| | |||||| || ||||| || ||||| Sbjct 4315 CTGTGACCTGCGCGATGA-GTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACG 4257 Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 || || |||||||| | ||||| ||||||| |||||| |||||||| ||| || ||| Sbjct 4256 CCGAGTCCCATGTCAGCTGAGCGTTGGTACATCTGGCACGAGAGCTCGCCGTTGGCGACG 4197 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 ||||||||||| | | ||| || |||||||| ||||| | ||||||||| |||||| Sbjct 4196 TAGAACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTCAGGTCCGCAGGGTTC 4137 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTC 145991 || || | | || || | | | || | |||||| |||||| || || | || Sbjct 4136 CATGCCGACATGATGATGCGAC-GATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTC 4078 Query 145992 CCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCC 146050 | |||||||| || ||||| || |||||| | | || | | | |||| ||| | Sbjct 4077 CGCCAGCTGGTCGACTCCCTGGCCAGAGTAATCCG-CATGCATGGTCGTGTACTTGGCAC 4019 Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCA 146110 | ||||| | ||||||||| || || || || || || || || | || | || || | Sbjct 4018 CAAAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCAA 3959 Query 146111 GCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCG 146170 | ||| | | ||| | ||| ||| || ||| | |||||||| | || |||| | Sbjct 3958 GACCGATGCTCTCTAGGTATTCCTTGGATCCATTGCCATCCCAGATATGGATGCCCTTGT 3899 Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230 | | | |||| || ||| || ||||||||||| ||||||||||| ||| | Sbjct 3898 CCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGC 3839 Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 | | |||||| || | ||||| |||||||| ||||| Sbjct 3838 CGCGCCAGAATACGCGTTTGGTCGTCAGCAGCGGGAA 3802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980469962400