Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq69 342 5e-89 seq562 98.7 1e-15 >seq69 Length=49210 Score = 342 bits (378), Expect = 5e-89 Identities = 458/628 (73%), Gaps = 12/628 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| | || | ||||||||| ||| |||||| | ||||| || || | || Sbjct 9099 GAGCCATTCCTCCTCGAGAACCCGAACCGTTTCGTGCTCTTCCCGATCCAGGAGAATGAG 9040 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCT- 116694 | |||| |||||||| |||||||||||| |||||||| | || ||| | ||||| Sbjct 9039 GTCTGGCAGATGTACAAGAAGGCCGAGGCGAGCTTCTGGACGGCTGAAGAGATCGACCTC 8980 Query 116695 GTCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 ||||| | | | || |||||| | | | | |||||||||||| | ||||||||||| Sbjct 8979 GTCCACGACCTCAAG-GACTGGAACAACCTCACGGACAACGAGCGCTACTTCATCAAGCA 8921 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGA-GCGTT 116813 |||||| || || ||||| ||||| || ||||||||||||||||| || | ||| | | Sbjct 8920 CGTGCTCGCGTTCTTCGCGGCCAGTGATGGCATCGTCAACGAGAACCTCG-CGATGAACT 8862 Query 116814 TCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 || ||| ||||||||||| | |||||||| |||||||| ||||| ||||| || || Sbjct 8861 TC-AGCAGCGAGGTGCAGGTTCCTGAGGCGCGTTGCTTCTATGGCTTCCAGATTGCGATT 8803 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 |||||| | |||||||| |||| ||| ||||||||||||||| | | | | Sbjct 8802 GAGAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACCAGACC 8743 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 ||| |||| | || | | ||||||||||||||| || ||||| | ||||||| Sbjct 8742 GAGAAGAACCACC---TTCTCCGCGCCATCGAGACGATCCCCTGCGTGCAGAAGAAGGCG 8686 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 | |||||||| ||| || | | ||||| |||| |||||| | || || Sbjct 8685 CACTGGGCGCTTAAGTGGTGCGACTCGCGCCGCGCCGCGTTCGCCGAGCGTATCGTCGCG 8626 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| || || |||||| ||||||| |||||| ||| | | || || ||||||||| Sbjct 8625 TTCGCTGCTGTTGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCTATCTTCTGGCTCAAG 8566 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || |||||||||||||| ||||| | ||| |||||||| ||||| | ||||||||| Sbjct 8565 AAGCGCGGCCTCATGCCTGGCCTCAGCTTCTCGAACGAGCTGATCTCGCGTGACGAGGGT 8506 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGT 117197 || || |||||||| || || |||||| Sbjct 8505 CTCCACTGCGACTTCGCGTGCCTGCTGT 8478 >seq562 Length=14249 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || ||||| |||| ||||| || || |||| ||| ||||| ||||| || |||| ||| Sbjct 14035 GGAATCCCTCCGGATCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGC 13976 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911 || || ||||||||||||||||||||| | |||||||| || ||| | ||| || | Sbjct 13975 ACGCTTTCGGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGT 13916 Query 40912 GGCGGCGGC 40920 || || ||| Sbjct 13915 GGTGGTGGC 13907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515135090465600