Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq208 152 4e-32 >seq208 Length=29794 Score = 152 bits (168), Expect = 4e-32 Identities = 527/816 (65%), Gaps = 16/816 (2%) Strand=Plus/Plus Query 132916 TGCGCAAATAATACATGCCCGTTTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCG 132975 |||||| || ||||| ||||| || || |||| |||||| || ||||| ||| || Sbjct 11676 TGCGCAGGTAGTACATACCCGTCTTAAGACCCTTCTTCCACGCATAGAAGTGCATGGACG 11735 Query 132976 ACACCACCGAGTAAGTGGGTTCGGCGACAAATAAATTCAGCGATTGACTCTGATCTATGA 133035 || | | || || || |||| | || ||||| || ||||| ||| Sbjct 11736 TCAGCTTGCTGATCGTCGGCTCCGCGATGTGCACGTTGAGCGACTGGCTCTGGCAGATGT 11795 Query 133036 AAGGAGCACGGTCGGCGGCCATGTTTATTATACACTTTGATTTGATCTCCCATGCCGTCT 133095 | | | |||||||||||||| | | | ||| ||||||||||| |||||| Sbjct 11796 AGGCGCCGCGGTCGGCGGCCATATCGAGCACGGCCTTCTGCTTGATCTCCCACACCGTCT 11855 Query 133096 TGAAGAGATTCTTGACATGCTGTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGG 133155 || | | ||| || | || || || | ||||||||| || |||| ||| Sbjct 11856 TGTACTTCTCCTTCACGGCATCCGGGATCACGCGCACGTTCTGCACTGAGCCGTGGTCGT 11915 Query 133156 CCAAAATCTTGTTGCGCAATTCCGGAGTGTAAATGTCGAGATCGATTAGCGCTTTGACGA 133215 || |||| |||||||| || || || | || |||| ||||| ||| | || | | Sbjct 11916 GCAGGATCTGGTTGCGCACCTCGGGCGTCCAGATACCGAGCTCGATGAGCTCCTTCATCA 11975 Query 133216 GATACTGGTTGACCA-CTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGAC 133274 | |||| ||| || | | |||| |||||| || || ||||| | | || | || | | Sbjct 11976 GGTACTTGTTCACGATCGTGAA-CTCGCCTGCAAGCACGCGGCGGTTGTACATGTTGGTC 12034 Query 133275 GTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATG 133334 |||||||| |||| || ||||||||||| || |||||||| |||| |||||| ||||| Sbjct 12035 GTGAACGGCTCGATCGACTCGTTGTTGCCCAGGATCTGCGCGGTCGACGCCGTCGGCATC 12094 Query 133335 TACGCCACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTC 133394 ||| | || || ||||| | || ||||||| | | || || | || | Sbjct 12095 GGCGCGAGCAGCAGCGAGTTGCGCACACCGTACTGCGCGACGCTGGCCTTGAGCGCGGCC 12154 Query 133395 CAGTCCCACAGATTGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGC 133454 |||||||| || | ||| | || ||| | || | | ||| | || Sbjct 12155 CAGTCCCAGAG---GCCGGA-----CGTCGGCGT----GACGCCCCACATGTCGTACTGG 12202 Query 133455 AAAATACCCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCC 133514 || || ||| ||||||| || | || ||| | || || |||| || || Sbjct 12203 AAGATGCCCTTGCTCACGGGTGAGCCCTCGTAGCTGGCGTACGGGCCGTGCTCCTTCGCG 12262 Query 133515 AGCTCGCAGCTA-GCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGATTGAATAGTTGAC 133573 ||||| || | | ||||||| ||| | ||||| | || || ||| | ||||| Sbjct 12263 AGCTC-CATCGAGGCCTCCATCGCGCCGAAGTACAGCGTCTCGAAGATGTTCTTGTTGAG 12321 Query 133574 GAACCTGGCATCGTCGCTATCGTAGGCGATGTCGAGAAGAACAAACGCGTCGGCCAAACC 133633 | ||| |||||||| || | ||| | | | || | |||||||| || | ||| Sbjct 12322 CTCGCGGGCCTCGTCGCTCTCAAACGCGTAGCCCATGAGGATGAACGCGTCCGCGAGACC 12381 Query 133634 CTGTATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGGG 133693 ||| | ||||| |||||| || || || ||||| | ||| | ||||| | || Sbjct 12382 CTGCACGCCGATGCCGATCGGGCGGTGGCGCAGGTTGCTTCGCTCAGCCTCGGGGATCGG 12441 Query 133694 ATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCG 133729 |||| ||||| |||||||| ||||||||| ||||| Sbjct 12442 GTAGTAGTTGATGTCGATGACCTTGTTGAGGTTGCG 12477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433761347757520