Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq69 147 3e-30 >seq69 Length=49210 Score = 147 bits (162), Expect = 3e-30 Identities = 386/585 (66%), Gaps = 7/585 (1%) Strand=Plus/Plus Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 ||| || || ||||| |||||||| ||||||||||| | || | ||||| || | Sbjct 8478 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATCAGCTCGTTCGAGA 8537 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || | Sbjct 8538 AGCTGAGGCCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCG 8597 Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG- 33752 | |||||||| || || || ||||| || || | | | ||| | | |||||| | Sbjct 8598 AGAAGAAGATGCCCTCAACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGGC 8657 Query 33753 TCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33810 | || |||||| | ||||| | |||||||| | || || || ||||| || | Sbjct 8658 GCGAGTCGCACCACTTAAGCGCCCAGTGCGCCTTCTTCTGCACGCAGGGGATCGTCTCGA 8717 Query 33811 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33870 |||| | || | ||| || || | || || | || || ||||| | || Sbjct 8718 TGGCGCGGAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGCG 8777 Query 33871 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33930 |||| ||||| || ||||| ||||| || ||||| || || ||||| || | |||| Sbjct 8778 AGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCATAGAAGCAACGCGCCT 8837 Query 33931 CGGTAATCTGCACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTATTCCATC 33988 | | || |||||| || | | || |||| || | || || || || || ||||| Sbjct 8838 CAGGAACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCATC 8895 Query 33989 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTT 34048 |||||| || || ||||| | || || || || || || |||| || || || Sbjct 8896 ACTGGCCGCGAAGAACGCGAGCACGTGCTTGATGAAGTAGCGCTCGTTGTCCGTGAGGTT 8955 Query 34049 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 34108 ||||| || |||| || | | || | ||||| | ||||| || ||||| Sbjct 8956 GTTCCAGTCCTTGAGGTCGTGGACGAGGTCGATCTCTTCAGCCGTCCAGAAGCTCGCCTC 9015 Query 34109 TGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 34153 ||||| || ||||| | ||||| |||| | ||||| ||||| Sbjct 9016 GGCCTTCTTGTACATCTGCCAGACCTCATTCTCCTGGATCGGGAA 9060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629714782276800