Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq69 150 3e-31 >seq69 Length=49210 Score = 150 bits (166), Expect = 3e-31 Identities = 389/586 (66%), Gaps = 9/586 (2%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || || ||||| |||||||| ||||||||||| | || || ||||| || | Sbjct 8478 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATCAGCTCGTTCGAGA 8537 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || || Sbjct 8538 AGCTGAGGCCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATAGA-GCAGAACGAGCCC 8596 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 || |||||||| || || || || || || || || | | ||| | | ||||| | Sbjct 8597 GAGAAGAAGATGCCCTCAACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGG 8656 Query 50131 -TCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 | || |||||| | ||||| | |||||||| | || || || ||||| || Sbjct 8657 CGCGAGTCGCACCACTTAAGCGCCCAGTGCGCCTTCTTCTGCACGCAGGGGATCGTCTCG 8716 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 ||||| | || | ||| || || | || || | || || ||||| | || Sbjct 8717 ATGGCGCGGAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGC 8776 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 |||| ||||| || ||||| ||||| || ||||| || || ||||| || | ||| Sbjct 8777 GAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCATAGAAGCAACGCGCC 8836 Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCCGT 50365 || | || |||||| || | | || ||||| || | || || || || || || | Sbjct 8837 TCAGGAACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCAT 8894 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT 50425 ||||||| || || ||||| | || || || || || | |||||| || || | Sbjct 8895 CACTGGCCGCGAAGAACGCGAGCACGTGCTTGATGAAGTAGCGCTCGTTGTCCGTGAGGT 8954 Query 50426 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 50485 | ||||| || |||| || | | || | ||||| | ||||| || |||| Sbjct 8955 TGTTCCAGTCCTTGAGGTCGTGGACGAGGTCGATCTCTTCAGCCGTCCAGAAGCTCGCCT 9014 Query 50486 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 50531 | ||||| || ||||| | ||||| |||| | ||||| ||||| Sbjct 9015 CGGCCTTCTTGTACATCTGCCAGACCTCATTCTCCTGGATCGGGAA 9060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718151542618400