Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq69 163 4e-35 >seq69 Length=49210 Score = 163 bits (180), Expect = 4e-35 Identities = 577/877 (66%), Gaps = 52/877 (6%) Strand=Plus/Minus Query 125014 ATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCG 125073 |||| | ||| | |||||||| ||||| |||| ||| ||||||| |||||| ||| Sbjct 9044 ATGAGGTCTGGCAGATGTACAAGAAGGCCGAGGCGAGCTTCTGGACGGCTGAAGAGATCG 8985 Query 125074 ATCT-GTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTT 125132 | || ||||| | |||| | || ||| | | | | || || | ||||| | || Sbjct 8984 ACCTCGTCCACG-ACCTCAAGGACTGGAACAACC---TCACGGACAACGAGCGCTACTTC 8929 Query 125133 ATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT---G 125189 || |||| | | || ||||| || | | ||||| ||||||||||| || || | Sbjct 8928 ATCAAGCACGTGCTCGCGTTCTTCGCGGCCAGTGATGGCATCGTCAACGAGAACCTCGCG 8869 Query 125190 TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAA 125249 ||| || ||| ||| || |||| |||| | ||||| || || ||||| Sbjct 8868 ATGA-AC--TTCAGCAGCGAGGTGCAGGTTCCTGAGGCGCGTTGCTTCTATGGCTTCCAG 8812 Query 125250 ATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGC 125309 || |||||||||| | |||||||| ||||||| || || |||| |||||| Sbjct 8811 ATTGCGATTGAGAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAG 8752 Query 125310 GATCCGCAACGTAAA----CACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACG 125365 || | | | || || ||| | ||| ||| ||||| ||| | || | | | Sbjct 8751 GACCAG-ACCGAGAAGAACCACCTTCTCCG---CGCCATCGAGACGATCCCCTGCGTGCA 8696 Query 125366 TAAAAAGGCTCAATGGGTGATTCGGTGGATCGA-TGACGACAAGTCTTCGTACGCCGACA 125424 || ||||| || |||| | || |||| ||| | || | | | ||| |||||| Sbjct 8695 GAAGAAGGCGCACTGGGCGCTTAAGTGGTGCGACTCGCGCCGCGCCG-CGTTCGCCGAGC 8637 Query 125425 GACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGCGGCCATC 125483 | | || || ||||| || || |||||||||||||| ||||| | ||| ||| | ||| Sbjct 8636 GTATCGTCGCGTTCGCTGCTGTTGAGGGCATCTTCTTCTCGGGCTCGTTCTGCT-CTATC 8578 Query 125484 TTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCT 125543 || ||||||||||||||||| |||||||| || || | | |||||| | || || Sbjct 8577 TTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGCCTCAGCTTCTCGAACGAGCTGATCTCG 8518 Query 125544 CGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT-TTCGCAACT-----ATCTG 125597 || |||||||| || ||||| ||||| || || |||| ||| | || | | Sbjct 8517 CGTGACGAGGGTCTCCACTGCGACTTCGCGTGCCTGCTGTACTCGAAGCTCGCCAACAAG 8458 Query 125598 CGTCCCGAGT-GCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656 | || |||| | ||||| || || |||| | | ||||||||| Sbjct 8457 CTCCCTGAGTCTCGCATCCA-CG------AGATCAT-----TCG----CGATGCCGTTGC 8414 Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGT-CAGCATGATTGGCATGAACTGCA 125715 ||| || | |||||| | || || || ||||| ||| | || || ||||||| Sbjct 8413 GATCGAGAAGGAGTTTGTCCAGGACTCGCTCCCGGTGGAGC-TCATCGGTATGAACTCGT 8355 Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG-TTGAT-TGG 125773 || |||||| ||||||| ||||| || ||||| || || ||| | ||| | | | Sbjct 8354 CCCTCATGTGCCAGTACATTGAGTTCTGCGCCGATCGCCTCCTCCACGCGCTTGGTGTTG 8295 Query 125774 CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833 | |||||| ||||| | ||| || || || | ||| || || || || |||| Sbjct 8294 C--CAAGATCTACAAGGTGTCGAACCCGTTCGACTGGATGGACATGATCTCGCTCCAGGG 8237 Query 125834 TAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 ||||||||||| ||||||||| || |||||||| Sbjct 8236 CAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGTAC 8200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740938222085600