Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq513 152 3e-32 >seq513 Length=15584 Score = 152 bits (168), Expect = 3e-32 Identities = 377/570 (66%), Gaps = 19/570 (3%) Strand=Plus/Minus Query 25411 CGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGT 25470 ||||||| ||| |||||||| || || | || ||||| ||| || || || | |||| Sbjct 4399 CGAGCTGCACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 4340 Query 25471 GGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGT 25530 ||| || ||||| | ||||| || || | || || | || | || || Sbjct 4339 GGATGAAATCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCGT 4280 Query 25531 AGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGA 25590 |||| ||||||||||| || || |||| |||||||| | || | ||||| | ||| Sbjct 4279 AGCTCGCGATGTTAAAAGGCACGCCGAGTCCCATGTCAGCT-GAGCGTTGGTACATCTGG 4221 Query 25591 CACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCT 25650 ||||||||||| ||| | ||||| ||||| || | ||| ||||| || || || Sbjct 4220 CACGAGAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGACACGGCGGCAGCGCC 4161 Query 25651 ATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTT- 25709 || || ||| ||||||||| || ||| |||||||| | || | |||||| Sbjct 4160 ATCTCCTTCAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGTTC 4101 Query 25710 GTC-----CCTG---ATAAGATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAG 25761 ||| | || || | ||||| |||||| || || ||| || ||| Sbjct 4100 GTCTTGAGCTTGTGAATGACCTCCGC---------CAGCTGGTCGACTCCCTGGCCAGAG 4050 Query 25762 TAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACC 25821 || || || |||| |||||||| || || || | | ||||||||| || ||||| Sbjct 4049 TAATCCGCATGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCACTGGAAGCCATACACT 3990 Query 25822 GGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAA 25881 ||||| || || ||| |||| | || ||| || | | || | | || |||| Sbjct 3989 GGTCCGAGATCGCCAGCTTCACGATGTCCAAGACCGATGCTCTCTAGGTATTCCTTGGAT 3930 Query 25882 CCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCT 25941 |||||| | |||||||| | | ||||| || | | |||| ||||||| || Sbjct 3929 CCATTGCCATCCCAGATATGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCA 3870 Query 25942 CTGACGAACCACAGCAGCTCCGCCGTGACG 25971 |||| ||||||||||||||| ||| |||| Sbjct 3869 CTGATGAACCACAGCAGCTCTTCCGCGACG 3840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340083460723380