Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq69 147 3e-30 >seq69 Length=49210 Score = 147 bits (162), Expect = 3e-30 Identities = 386/585 (66%), Gaps = 7/585 (1%) Strand=Plus/Plus Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 ||| || || ||||| |||||||| ||||||||||| | || || ||||| || | Sbjct 8478 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATCAGCTCGTTCGAGA 8537 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || | Sbjct 8538 AGCTGAGGCCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCG 8597 Query 33416 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG- 33474 | |||||||| || || || ||||| || || | | | ||| | | |||||| | Sbjct 8598 AGAAGAAGATGCCCTCAACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGGC 8657 Query 33475 TCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33532 | || |||||| | ||||| | |||||||| | || || || ||||| || | Sbjct 8658 GCGAGTCGCACCACTTAAGCGCCCAGTGCGCCTTCTTCTGCACGCAGGGGATCGTCTCGA 8717 Query 33533 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33592 |||| | || | ||| || || | || || | || || ||||| | || Sbjct 8718 TGGCGCGGAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGCG 8777 Query 33593 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33652 |||| ||||| || ||||| ||||| || ||||| || || ||||| || | |||| Sbjct 8778 AGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCATAGAAGCAACGCGCCT 8837 Query 33653 CGGTAATCTGTACTTCTGTACAAAATCGTTC--CGCCAAATTTTCATTCACTATTCCGTC 33710 | | || ||| || || | | || |||| ||| | || || || || || || || Sbjct 8838 CAGGAACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCATC 8895 Query 33711 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTT 33770 |||||| || || ||||| | || || || || || || |||| || || || Sbjct 8896 ACTGGCCGCGAAGAACGCGAGCACGTGCTTGATGAAGTAGCGCTCGTTGTCCGTGAGGTT 8955 Query 33771 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTC 33830 ||||| || |||| || | | || | ||||| | ||||| || ||||| Sbjct 8956 GTTCCAGTCCTTGAGGTCGTGGACGAGGTCGATCTCTTCAGCCGTCCAGAAGCTCGCCTC 9015 Query 33831 TGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAA 33875 ||||| || ||||| | ||||| |||| | ||||| ||||| Sbjct 9016 GGCCTTCTTGTACATCTGCCAGACCTCATTCTCCTGGATCGGGAA 9060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622845503869600