Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq513 147 2e-30 >seq513 Length=15584 Score = 147 bits (162), Expect = 2e-30 Identities = 384/581 (66%), Gaps = 5/581 (1%) Strand=Plus/Minus Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250 ||||||||| ||||| || | |||||| || || || || | | || || || || || Sbjct 4365 GTAGATGTGCGCATCGCCGATCGTGTGGATGAAATCTCCAGCACGCAGCCCTGTGACCTG 4306 Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310 || | | ||| || || | ||||| || ||||||||||| || || | ||||| Sbjct 4305 CGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCGAGTCCCAT 4246 Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACA 20370 ||| | || | || |||| ||| || || ||||| |||| || || || || || || Sbjct 4245 GTCAGCTGAGCGTTGGTACATCTGGCACGAGAGCTCGCCGTTGGCGACGTAGAACTGGCA 4186 Query 20371 TAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACAT 20430 |||| |||||| ||||| ||||||||| | || |||||| |||||||| || |||| Sbjct 4185 GAACATGTGACACGGCGGCAGCGCCATCTCCTTCAGGTCCGCAGGGTTCCATGCCGACAT 4126 Query 20431 AATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTC 20490 ||||| | | ||||| || || | || | | | | | || || ||||| Sbjct 4125 GATGATGCGACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCCAGCTGGTC 4066 Query 20491 AAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCA 20550 | |||||||| | || || |||| | | | |||| || |||||||| | ||| Sbjct 4065 GACTCCCTGGCCAGAGTAATCCGCATGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCA 4006 Query 20551 CTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGC 20610 |||||| || || || ||||| | ||| || | | || | || ||| | | Sbjct 4005 CTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCAAGACCGATGCTCTC 3946 Query 20611 CAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA-CTCCTGTTCTTGAAAGCTCCC 20669 ||| | ||| |||| ||||| ||||| || | || ||| || || || | | Sbjct 3945 TAGGTATTCCTTGGATCCATTGCCATCCCAGATATGGATGCCCTTGTCCTGCAA-CGTCT 3887 Query 20670 TGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACA 20729 ||| || || || | | ||||| |||||||||| | | ||||| ||||| || | Sbjct 3886 TGGCGTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGCCGCGCCAGAATA 3827 Query 20730 CCCGCTTTGTGGTTAGTA-AGGGA--AAGTGGTCCCGCAGA 20767 | || || || || || | |||| | || ||| |||||| Sbjct 3826 CGCGTTTGGTCGTCAGCAGCGGGAAGATGTTGTCACGCAGA 3786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441300745890400