Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq562 102 6e-17 >seq562 Length=14249 Score = 102 bits (112), Expect = 6e-17 Identities = 179/258 (69%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 108343 GGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGC-CAC 108401 ||| |||| | |||||||||| || || ||||| | ||| ||||||||| ||| Sbjct 10654 GGGCTCGGCATCACGGCCGGCGCGCACCGCCTGTGGGCGCACCGCAGCTACAAGGCGCAC 10713 Query 108402 CGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCC 108461 ||| ||| | | | ||||| ||| ||| ||| |||| ||| ||| ||| Sbjct 10714 GGCCTCGTGC-GCTTCTTCCTCATGCTCTGCAATTCGATGGCGAACCAGGGCACGATCTT 10772 Query 108462 GCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACA 108521 || ||| | ||| ||| | || |||||||||||||| |||||| |||| ||||| || Sbjct 10773 CCACTGGTGCCGCGACCACCGCGTGCACCACAAGTACTCGGACACGTCGGCGGACCCGCA 10832 Query 108522 CAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCC 108581 | || | | | || |||| ||| ||||| |||||||||| | ||| |||||||| Sbjct 10833 CGACTCGGGCCGCGGCTTCTTCTTCGCGCACATGGGATGGCTGCTCGTGAAGAAGGACCC 10892 Query 108582 CGACGTGATCTCGGCCGG 108599 |||||| |||||| Sbjct 10893 GCGTGTGATCGAGGCCGG 10910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381712033700640