Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq69 239 5e-58 >seq69 Length=49210 Score = 239 bits (264), Expect = 5e-58 Identities = 395/559 (71%), Gaps = 12/559 (2%) Strand=Plus/Plus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| || ||| || |||||||| || | |||||||| | || || || ||||| || Sbjct 8478 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATCAGCTCGTTCGAGA 8537 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | | | ||| |||||||||||||| || |||||||| || || | | ||| ||||| Sbjct 8538 AGCTGAGGCCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCG 8597 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| |||||| || || ||||| || || | |||||| |||||| ||| | Sbjct 8598 AGAAGAAGATGCCCTCAACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCG-CGG 8656 Query 133067 TGCTGG-CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 || | || ||| |||||||| | ||||| | | ||||| || ||||| ||| Sbjct 8657 CGCGAGTCGCACCACTTAAGCGCCCAGTGCGCCTTCTTCTGCACGCAGGGGATCGTCTCG 8716 Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGA--GGAACGC-ACGTAGGTGTCGATGAGG 133182 |||||| | | || | |||| || | || | | ||| ||||||||||| Sbjct 8717 ATGGCGCGGAGAA---GGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGC 8773 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242 ||| |||| |||||||| | |||||| || || || || ||||| || ||||| ||| Sbjct 8774 AGCGAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCATAGAAGCAACGC 8833 Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGC-TCGACCAGATTTTCGTTGACGATGCC 133301 ||||| |||||||| || ||| | ||| | || || |||||||||||||| Sbjct 8834 GCCTCAGGAACCTGCACCTCGCTGCTGAAGTTCATCG-CGAGGTTCTCGTTGACGATGCC 8892 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 || ||||| ||||| || || ||||||||||||||||| | |||||||||||| | | Sbjct 8893 ATCACTGGCCGCGAAGAACGCGAGCACGTGCTTGATGAAGTAGCGCTCGTTGTCCGTGAG 8952 Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGAC-AGGTCCACCTCCTCGACGGTCCAAAACGACG 133420 | | |||||| | | | | ||||| ||||| | ||| || | ||||| || || Sbjct 8953 GTTGTTCCAGTC-CTTGAGGTCGTGGACGAGGTCGATCTCTTCAGCCGTCCAGAAGCTCG 9011 Query 133421 CCTCGGCTTTTTTGTACAT 133439 ||||||| || |||||||| Sbjct 9012 CCTCGGCCTTCTTGTACAT 9030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500091146790400