Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq69 158 2e-33 >seq69 Length=49210 Score = 158 bits (174), Expect = 2e-33 Identities = 201/274 (73%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| ||| || ||||| | |||||||| || || | |||||| | Sbjct 8772 CTCATCGACACGTACATCAAGGACCAGACCGAGAAGAACCACCTTCTCCGCGCCATCGAG 8713 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 102167 || | || || | || ||||| ||| | ||||| | ||||||| || | | || Sbjct 8712 ACGATCCCCTGCGTGCAGAAGAAGGCGCACTGGGCGCTTAAGTGGTGCGACTCGC-GCCG 8654 Query 102168 CGTTCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 || | || || ||||| || |||| || || ||||||||| ||||||||||| || Sbjct 8653 CGCCGCGTTCGCCGAGCGTATCGTCGCGTTCGCTGCTGTTGAGGGCATCTTCTTCTCGGG 8594 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 || |||||| |||| | |||||||||||||| || |||||||| || ||| ||||||| Sbjct 8593 CTCGTTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGCCTCAGCTTCTC 8534 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| ||||| ||||||||||| |||||| Sbjct 8533 GAACGAGCTGATCTCGCGTGACGAGGGTCTCCAC 8500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620641063803200