Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq4402 95.1 3e-14 >seq4402 Length=1343 Score = 95.1 bits (104), Expect = 3e-14 Identities = 329/508 (65%), Gaps = 14/508 (3%) Strand=Plus/Minus Query 121129 CTTAATCTCGTCAAAGCGTGTCTGAGACCAATCACATGAATCCATCTTGTTGATTCCAAC 121188 ||| ||||||| | || | || ||||| || || || ||||||||||||| || || Sbjct 504 CTTGATCTCGTTGTAACGAGCCTCCGACCAGTCGCACGAGTCCATCTTGTTGACACCGAC 445 Query 121189 AATAACTTTCTCAATACCCAAAAGAGCAAGA--ATACGTGCGTGAAAACGTGTTTGACCT 121246 | | | ||||||||| | ||| |||| | ||| ||||| || || || || Sbjct 444 GACGATCTGCTCAATACCGAG--GAGGAAGAGCAGACGAGCGTGCTGGCGCGTCTGGCCC 387 Query 121247 TGTGGGATTCCAGCAGAAC----GATCGCCTTTCGCAATAGCAGATTCAAAACCAttttt 121302 | || || || | | || | || || ||||| | || |||||| || Sbjct 386 TCATCGACACC----GATCTTGGGGTCAGCCTTGGCGATAGCCGCCTCGAAACCACCCTT 331 Query 121303 ttCAGCAGGAATAAGAATAAAAGCAGCATCGGCTT-GTCCGACGCCTGAAATCATATTCT 121361 || || || | || || | | | ||||| || | |||| || | ||||| |||| Sbjct 330 CTCGGCCGGGACGAGGATGAGACCGGCATCAGCGCAGCCCGAACCC-GTGATCATGTTCT 272 Query 121362 TAATAAAGTCAATATGGCCTGGTGCATCAATAATAGAATAATGATAAGAATCTGTGTAAA 121421 | || |||| ||||||| || ||||| | || | || || || || ||| | | Sbjct 271 TGATGTAGTCCTTATGGCCAGGGGCATCGACGATCGTGTAGTGGTAGTTGTCCGTGAAGA 212 Query 121422 ATTCCTTAGTATTACAATTTACTGTAATTCCGCGCTCACGCTCTTCCTTGTTGTTATCCA 121481 | ||||| || ||||| | | || | || ||||||||||| |||||| |||||| Sbjct 211 ACTCCTTGGTGTTACACTGGATCGTCACACCACGCTCACGCTCCTCCTTGCACGTATCCA 152 Query 121482 TGTAATAAGCAAATGCAAAACTAGATTTGCCGTTTGCGTCGGCAAGTTCCTGCAACTTCG 121541 | || || || || || || || ||||| || || ||||| |||| | ||| | Sbjct 151 TATAGTACGCGAAGGCGAACGACGACTTGCCCTTGGCATCGGCCTCAGCCTGGAGCTTGG 92 Query 121542 CCATCTCACGAGCATTTATGCCTCCCAATTTAAAGATAAGATGACCGGTTGTTGTTGACT 121601 |||||||||| | || || || | || ||||| || || || || || || |||| Sbjct 91 CCATCTCACGCTCGCCGATACCGCCGAGCTTGAAGATGAGGTGGCCCGTCGTGGTCGACT 32 Query 121602 TTCCCGAGTCAACTTCACCACAGACCAC 121629 | || | || || | || || ||||| Sbjct 31 TGCCGGCATCGACGTGGCCGCACACCAC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186614209130660