Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq208 105 2e-17 >seq208 Length=29794 Score = 105 bits (116), Expect = 2e-17 Identities = 361/547 (66%), Gaps = 28/547 (5%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || ||||||||| || ||| || || || ||||| || ||||| || ||| Sbjct 13080 CCCATGCTGCGCGTGTTCAACGACACGGCGCGTTATGTGGATCAGGGTGGCGGTAAGCGC 13021 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || ||||| | || |||||||||||||||||||||||||| ||| | Sbjct 13020 AAGGGCTCGTTCGCGATGTACCTGGAGCCGTGGCACGCCGACATCTTCGAGTTCCTCGAC 12961 Query 255101 CTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTC 255157 || | | |||| ||||| |||| || ||| || || ||| | ||| | Sbjct 12960 CT---CAAGAAGAACCACGGCAACGAGCTGCACCGCGCGCGTGATCTCTTCTACGCGATG 12904 Query 255158 TGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGA--GACGAGACCTGGAGCCTCATG 255214 ||| | ||||||||| ||| ||||| || | | | |||| |||||||| | Sbjct 12903 TGGATCCCCGATCTGTTCATGAAGCGCGTTGAGGCCAACGGCGAG---TGGAGCCTGTTC 12847 Query 255215 TGTCCCAACTTATCGCCCGG--TCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGT 255272 || || ||| |||| || |||| ||| | |||||||||||||| || |||| Sbjct 12846 TGCCCGAACGAGGCGCCGGGTCTCTACACGA--CGTGGGGTGACGAGTTCGAGGCGCTGT 12789 Query 255273 ATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGG 255331 | | |||||||||| | ||||| | || | | | | | | |||| || || ||||| Sbjct 12788 ACCACCAGTACGAGCGCGAGGGCCGCGCGCGCAAGACGA-TCCGCGCGCAGCAGCTCTGG 12730 Query 255332 AACACGATGGTGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGAC-C 255389 | |||| | || | |||| | || || || | ||||| | | | |||| ||| | Sbjct 12729 TTCGCGATCCT-CGAGTCGCAGATCGAGACGGGCACGCCGTACATGCTCTACAAGGACTC 12671 Query 255390 ACATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCG---AACCTGT 255446 || |||| ||||||||| | ||| ||| ||||| | ||||| ||||| | Sbjct 12670 GTGCAACCGCA-AGTCGAACCAGCAGAACCTCGGCACGAT---CCGCTCGAGCAACCTCT 12615 Query 255447 GCACCGAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTCCA 255506 || |||| | | ||||||| | | ||||| || || |||||| | ||||||| Sbjct 12614 GCTGCGAGGTGCTTGAGTACACGTCGCCCGACGAGGTCGCGGTGTGCAACCTCGCGTCCA 12555 Query 255507 TCTCGCT 255513 || |||| Sbjct 12554 TCGCGCT 12548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588070221751700