Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq69 158 1e-33 seq215 89.7 6e-13 >seq69 Length=49210 Score = 158 bits (174), Expect = 1e-33 Identities = 201/274 (73%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 94731 ||||| |||| ||| || ||||| | |||||||| || || | |||||| | Sbjct 8772 CTCATCGACACGTACATCAAGGACCAGACCGAGAAGAACCACCTTCTCCGCGCCATCGAG 8713 Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 94791 || | || || | || ||||| ||| | ||||| | ||||||| || | | || Sbjct 8712 ACGATCCCCTGCGTGCAGAAGAAGGCGCACTGGGCGCTTAAGTGGTGCGACTCGC-GCCG 8654 Query 94792 CGTTCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 || | || || ||||| || |||| || || ||||||||| ||||||||||| || Sbjct 8653 CGCCGCGTTCGCCGAGCGTATCGTCGCGTTCGCTGCTGTTGAGGGCATCTTCTTCTCGGG 8594 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 || |||||| |||| | |||||||||||||| || |||||||| || ||| ||||||| Sbjct 8593 CTCGTTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGCCTCAGCTTCTC 8534 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| ||||| ||||||||||| |||||| Sbjct 8533 GAACGAGCTGATCTCGCGTGACGAGGGTCTCCAC 8500 >seq215 Length=29001 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 169312 GAGCTGTGTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACC 169371 |||||| | | | | || ||||| || ||| ||| ||||| || |||||||| || Sbjct 9183 GAGCTGCGCGTCCGTCGCGTCGCGCACGTTCAGCACCTTGCCACGCAGCGGGAAGACGCC 9124 Query 169372 GTAGTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACC 169431 ||| | || || || ||||| | ||| |||||||||||||| | ||| |||||||| || Sbjct 9123 GTACTTGTCGCGTCCGACGACCGCGAGTCCCGCGACTGCGAGCGCCTTGGCCGAGTCGCC 9064 Query 169432 CTCGGTGACGATGAGCG 169448 || |||| ||| |||| Sbjct 9063 TTCCGTGAGGATCAGCG 9047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583165582674400