Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq4905 176 2e-39 >seq4905 Length=1151 Score = 176 bits (194), Expect = 2e-39 Identities = 342/499 (69%), Gaps = 21/499 (4%) Strand=Plus/Plus Query 66248 CATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66307 ||||||||| |||||| || | || | | ||||||||| |||||| || || |||| Sbjct 190 CATCGACGCCGAGCACGCCATCGATGCGCACTACGCCAAGCAGCTCGGCGTCAACATCGA 249 Query 66308 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66367 | | ||| | ||||| ||| | ||||||||||| || ||||||| ||| || Sbjct 250 CGAGCTCTACATCTCGCAGCCCGACTCGGGCGAGCAGGCGCTCGAGATCGCCGACACGCT 309 Query 66368 CGTCAAGTCTGGCGAGCTGTC--CATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCG 66425 || ||| ||| || ||| | |||||||||| ||| || || || || |||||| Sbjct 310 TGTGCGGTCGGGC--GCCGTCGACGTCGTCGTCGTCGACAGCGTCGCTGCGCTCGTGCCG 367 Query 66426 CGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATG 66485 ||||||||||| |||||||| || || ||| || ||| |||| ||||| |||||| Sbjct 368 CGCGCCGAGCTGGAAGGCGAGATGGGCGACCAGCAGATCGCGTTGCAGGCGCGGCTCATG 427 Query 66486 TCGCAGGCCATGCGCAAGCTCACCGGCACCATCTC-CAGCA---CCAA---CACGCTGAC 66538 ||||| ||||||||||||| || ||| | |||| |||| || ||| | Sbjct 428 AGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAGTCCAACTGCATGCTCA- 482 Query 66539 GCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGAC 66598 ||| | |||||| | ||| |||| | |||| | | || || || |||| Sbjct 483 --TCTTCCTGAACCAGATCCGCCAGAAAGTGGGCATCCT---CTTTGGTTCGCCCGAGGT 537 Query 66599 CACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCAT 66658 ||| | ||||||| ||| || | | |||||| || || || | || | || |||| Sbjct 538 CACGTCAGGCGGCACGGCGCTGCGCTACTACGCGTCCGTGCGGCTCGACATTCGGCGCAA 597 Query 66659 CGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAA 66718 ||| | ||||||||||| ||| ||||||||| | | || ||||||| ||| Sbjct 598 GGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGTCGCCAA 657 Query 66719 GAACAAGCTGGCCCCGCCG 66737 ||||||||| || ||||| Sbjct 658 GAACAAGCTCGCGTCGCCG 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240921646698000