Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq513 188 6e-43 >seq513 Length=15584 Score = 188 bits (208), Expect = 6e-43 Identities = 387/573 (68%), Gaps = 2/573 (0%) Strand=Plus/Plus Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279 || |||||||||||||| ||||| || | |||| ||||| | || |||||||||||| Sbjct 3802 TTCCCGCTGCTGACGACCAAACGCGTATTCTGGCGCGGCGTCGCGGAAGAGCTGCTGTGG 3861 Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339 ||| | || || | ||| ||| ||||| | | | | ||| | | |||||||| Sbjct 3862 TTCATCAGTGGCGACACAAACGCCAAGACGTTGCAGGACAAGGGCATCCATATCTGGGAT 3921 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCGGGAGGAGGGCGA 34398 | | || || || | || || | || ||| | | ||| || | ||||| Sbjct 3922 GGCAATGGATCCAAGGAATACCTAGAGA-GCATCGGTCTTGGACATCGTGAAGCTGGCGA 3980 Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGA 34458 | || || || || || ||||||||| | |||||||| || |||| | | | Sbjct 3981 TCTCGGACCAGTGTATGGCTTCCAGTGGCGCCACTTTGGTGCCAAGTACACGACCATGCA 4040 Query 34459 AGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCG 34518 ||||| || || || ||||||| ||||||||| | | || || ||| | ||| Sbjct 4041 TGCGGATTACTCTGGCCAGGGAGTCGACCAGCTGGCGGAGGTCATTCACAAGCTCAAGAC 4100 Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 |||||| | || | | ||| | |||| || |||||||| ||| || ||| Sbjct 4101 GAACCCAAACGATCGTCGCATCATCATGTCGGCATGGAACCCTGCGGACCTGAAGGAGAT 4160 Query 34579 GGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTG 34638 |||||| || ||||| |||| ||||||| ||||||||||| || || ||||| || || Sbjct 4161 GGCGCTGCCGCCGTGTCACATGTTCTGCCAGTTCTACGTCGCCAACGGCGAGCTCTCGTG 4220 Query 34639 CCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTA 34698 |||| | || ||||| || | |||||||| | || ||||| || ||||| || || || Sbjct 4221 CCAGATGTACCAACGCTCAGCTGACATGGGACTCGGCGTGCCTTTTAACATCGCGAGCTA 4280 Query 34699 CGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCA 34758 ||| ||| | || | ||||| || ||| ||| || | |||| || | | || Sbjct 4281 CGCGCTGTTGACTCGACTCATCGCGCAGGTCACAGGGCTGCGTGCTGGAGATTTCATCCA 4340 Query 34759 TACGTTGGGGGATGCGCATATCTACCTGAACCA 34791 ||| | || |||||||| |||||| ||||||| Sbjct 4341 CACGATCGGCGATGCGCACATCTACTTGAACCA 4373 Score = 188 bits (208), Expect = 6e-43 Identities = 387/573 (68%), Gaps = 2/573 (0%) Strand=Plus/Minus Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613 ||||||| |||||| |||||||| || | ||| || | | || |||| | || ||| Sbjct 4373 TGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAATCTCCAGCACGCAGCCCT 4314 Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCT 6673 ||| || ||||| | || | ||| ||||| || || ||||| || ||||| || Sbjct 4313 GTGACCTGCGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCG 4254 Query 6674 AACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAG 6733 | |||||||| | || ||||| || | |||||| || ||||| || || ||||||||| Sbjct 4253 AGTCCCATGTCAGCTGAGCGTTGGTACATCTGGCACGAGAGCTCGCCGTTGGCGACGTAG 4194 Query 6734 AATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCAC 6793 || ||||||| |||| ||||| || ||||||||| || ||| |||||||| Sbjct 4193 AACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTCAGGTCCGCAGGGTTCCAT 4134 Query 6794 GCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC 6853 || |||| | ||| | | || | |||||| ||| | ||| || || | | | Sbjct 4133 GCCGACATGATGATGCGACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCC 4074 Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 |||||||| ||||||| || || || ||||| | | | |||| || |||||| Sbjct 4073 AGCTGGTCGACTCCCTGGCCAGAGTAATCCGCATGCATGGTCGTGTACTTGGCACCAAAG 4014 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGA-ACCC 6972 || | ||||||||| || || || || || | ||||| | || ||| | | ||| Sbjct 4013 TGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCAAGACCG 3954 Query 6973 CCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGA 7032 || | || || | || || || | | |||||||| | | ||| | | Sbjct 3953 ATGC-TCTCTAGGTATTCCTTGGATCCATTGCCATCCCAGATATGGATGCCCTTGTCCTG 3895 Query 7033 GAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTT 7092 | | ||||| ||| ||| | || || | ||||||||||||||| || | ||||| Sbjct 3894 CAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGCCGCG 3835 Query 7093 CCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125 |||| | || ||||| |||||||||||||| || Sbjct 3834 CCAGAATACGCGTTTGGTCGTCAGCAGCGGGAA 3802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448189221163200