Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq513 178 1e-39 >seq513 Length=15584 Score = 178 bits (196), Expect = 1e-39 Identities = 399/602 (66%), Gaps = 9/602 (1%) Strand=Plus/Minus Query 29634 CGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGT 29693 ||||||| | | | ||||||||||| |||| | ||||| ||| ||||| || | |||| Sbjct 4399 CGAGCTGCACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 4340 Query 29694 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 29753 ||| || ||||| | ||||| ||||| || || || | || | || | || Sbjct 4339 GGATGAAATCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCGT 4280 Query 29754 AGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGC 29813 |||| ||||||||||| ||||| ||||| |||||||| |||| | ||||| | ||||| Sbjct 4279 AGCTCGCGATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGTTGGTACATCTGGC 4220 Query 29814 ACGAGAGCTCTCCGTCGCTCACGTAAAACTGAC---ACATGGCATGGCACGGAGGAAGGG 29870 |||||||||| |||| | ||||| ||||| | ||||| || ||||| || || | Sbjct 4219 ACGAGAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATG---TGACACGGCGGCAGCG 4163 Query 29871 CCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGT 29930 |||| || ||| |||||||| || ||| ||||||||| | || | ||||| Sbjct 4162 CCATCTCCTTCAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGT 4103 Query 29931 TGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTG 29990 | || ||| || | | | | |||||| || || ||| || ||||| || | Sbjct 4102 TCGTCTTGAGCTTGTGAATGACCTCCGCCAGCTGGTCGACTCCCTGGCCAGAGTAATCCG 4043 Query 29991 NNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCA 30050 | || || | ||||||||| || ||||| ||||| | Sbjct 4042 CATGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCACTGGAAGCCATACACTGGTCCGA 3983 Query 30051 GGTCTCCCTCTTCCCTGTGCTCGAAG-CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTG 30109 | || || |||| | || || ||| || | | || | | || |||| || ||| Sbjct 3982 GATCGCCAGCTTCACGATG-TCCAAGACCGATGCTCTCTAGGTATTCCTTGGATCCATTG 3924 Query 30110 GCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACG 30169 | |||||||| | | ||||| || | | |||| ||||||| || |||| | Sbjct 3923 CCATCCCAGATATGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATG 3864 Query 30170 AACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG-GGG 30228 |||||||||||||| ||| ||||| | ||| || || | |||||||| || || ||| Sbjct 3863 AACCACAGCAGCTCTTCCGCGACGCCGCGCCAGAATACGCGTTTGGTCGTCAGCAGCGGG 3804 Query 30229 AA 30230 || Sbjct 3803 AA 3802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406098551511160