Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq17 190 4e-43 seq836 100 6e-16 >seq17 Length=23322 Score = 190 bits (210), Expect = 4e-43 Identities = 688/1057 (65%), Gaps = 51/1057 (5%) Strand=Plus/Minus Query 318990 CTCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAG 319049 ||| ||||| ||||| || ||||||| ||||| |||||||||| || ||||| || Sbjct 14202 CTCCTTGTCCTCACCCGACTGGAAACGCCACTGGATGTACTGGTTGGCCGTAATGTCGAG 14143 Query 319050 ATGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATG 319109 || ||||| |||||||||||||| ||||| || ||||| || | |||||| || || Sbjct 14142 GTGCTCCTCAATGTGGTGGAAAGCGTGCTGGGCAACGTAGGCGAAACGCATGGCCGGGTG 14083 Query 319110 CTTCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCT 319169 |||||| || |||||| || | || | | ||||| |||| ||| ||||| || Sbjct 14082 CTTCCACACCGTACCGACCGTAGGCTCGACCTCACCCGTCAGCATCTTGATGAGCGTCGA 14023 Query 319170 TTTCCCCGCACCGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCATT 319229 || || |||||||| ||| | || | || | ||| |||||| || | | Sbjct 14022 CTTACCGGCACCGTTCGGGCCGATAACGGCAATACGCGAGGCCAGCGA-ACACG-----T 13969 Query 319230 CACGTTG---TCAAAGATTA---GTTTTTCCGTACCCGGATACTTGAACCCCACACCGCG 319283 ||||||| ||| ||| | || || || || |||| | || || || Sbjct 13968 CACGTTGATGTCACGGATCGACGGCTTGTCGCGGCCAGGGTACTGGTACGAG-CAGTTCG 13910 Query 319284 T-AGCTTCATGAT-GGC--ACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGG 319339 | || ||||| ||| || | ||| ||||| | | ||||| || ||||| | Sbjct 13909 TGAGACGAATGATCGGCTTACCCTTGTTCT---TGATATCAGCAAGGAAACCCGGCTCAG 13853 Query 319340 GGAACTTCCACGTG--GTCTTCGTC-TCGGTAAGGGCGTAGTAACTCGCTGATTCGGGAC 319396 | ||| | || || | | || | || ||| ||||||| || | || || Sbjct 13852 GAAACGTGAACTTGAAGGCAGCGGCCTC---AAGCTCGTAGTACGTCTTGGCCTCCGGCT 13796 Query 319397 GCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGT 319456 || ||| ||||||||||| || || ||||||||| |||| ||||| |||| |||| Sbjct 13795 TCTGCTTGACGAACTCGGAGAGGTTACCCTTGTACGTCTTGAGCTTACGGTT---CTCGT 13739 Query 319457 AATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGC 319516 | ||||| || ||||| || | ||||||||| || |||||||| ||||| || | Sbjct 13738 AGTGGATGATGTTCGTGCAGACCGTGTCGAGGAAACCAGAGTCGTGCGACACGATGAGCG 13679 Query 319517 ACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAA 319576 ||| |||| | | ||| | | ||||| || | |||| | ||||| |||| | Sbjct 13678 ACGTCACGTTCGTGAGGCTCGTGAGGTAGTCCTCGAGCCACTTGACGTTGTGCACATCCA 13619 Query 319577 GATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAA 319636 ||||| |||||||| |||||||| || | | || |||| |||||| ||||| || | Sbjct 13618 AGTGGTTCGTCGGCTCATCAAGAAGGAGGATATCAGCCTTCATGAGCATGGCACGGGCCA 13559 Query 319637 GAGCGAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAA 319696 |||| ||||| ||||| || || | |||| | |||| |||| || | Sbjct 13558 ACTCGAGCTTCATCTTCCAACCACC--AGAGAGGGCACCGACAGGCA---TGGC-CTGCA 13505 Query 319697 TATCA------AAGCCAACCGATTCTAGAGTA-GTTAC-GATCTTTTCACGAGACCAAAT 319748 | ||| ||||| || || ||| | | || || || ||||| | | | Sbjct 13504 TCTCAGCCGTGAAGCCGAC--GCTCGTGAGCATATCACGGACCTCCTCACGCGGC---AG 13450 Query 319749 GTTTTCCTTTACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGA 319808 ||| ||| | || ||| | ||||||||||||| | | || || Sbjct 13449 GTT---CTTGAGGGCCTCGTCACAGAACATGAAGTCAATGACCGGAAGCTCAGCCTCCTC 13393 Query 319809 CCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTC 319868 | | ||| | || || ||| | | || || | ||||| | ||||| || || Sbjct 13392 AGCCTGGAGGTTATGCTCGACGAAGACCGTCTTGAGCTCATCCTGGGTCGGGAAACCCTC 13333 Query 319869 AAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACA 319928 |||||||||||| || |||||||| || || || ||||| ||||| || || || Sbjct 13332 GAGCTGGCCGTTCGAGATGGCGCGCATAAGCGTCGACTTACCGCAACCGTTCGGGCCGCA 13273 Query 319929 CAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCC 319988 |||||||| |||| || || || ||| || || | ||||||||| ||||| | || Sbjct 13272 GAGACCGTAACGGTGGCCACGCTTGAGGCGGAGACGGGCGTTGTTCAGCAGAATCATACC 13213 Query 319989 ACCATATGCCAGAGAAAATTCACAATCACACAGATCC 320025 ||| || || || || || || || | || |||||| Sbjct 13212 ACCGTACGCGAGCGAGAACTCGCAGTTGCAGAGATCC 13176 >seq836 Length=7233 Score = 100 bits (110), Expect = 6e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 281742 GTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGA 281801 ||||||||||| | | ||||||| ||| || || |||||||| | || |||||||| Sbjct 1613 GTGAAGATATAGCGCGGACTCGCGGCGTCCTTGCCGCCCTGCAGGCGCGTGCCAAACTGT 1672 Query 281802 CCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACG 281861 ||| ||| ||| | | | ||| || ||||| || ||||| |||| |||||| Sbjct 1673 CCCGACGGATACAGCAATGGCAGGTTGTTAGCACCGACATAGTCCTGCGCCATGTTGACA 1732 Query 281862 ATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACA-TAACC 281920 || ||| || ||||| |||| |||||||| || || |||| || || ||| ||||| Sbjct 1733 ATCGTCGAGTGCAGCGACGCCTCGCCGTGGTGGTACGCAGTGTGCTC-GCTACAGTAACC 1791 Query 281921 ACTGAACTGTGCTACCTTCACGTC 281944 | || ||| || ||||| || || Sbjct 1792 AGCGAGCTGCGCGACCTTGACCTC 1815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057518235972800