Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq217 129 4e-25 >seq217 Length=11889 Score = 129 bits (142), Expect = 4e-25 Identities = 400/610 (66%), Gaps = 8/610 (1%) Strand=Plus/Minus Query 96999 CTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTG 97058 ||| || || ||||||| || || || || |||||| | | || | || | || Sbjct 4737 CTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGCACCTTAAGCGGTTCCACATG 4678 Query 97059 ATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGT 97118 |||| || ||||| ||||| || | ||||| || || ||||||| | | | || Sbjct 4677 GTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGT 4618 Query 97119 GACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAG 97178 ||| || ||||| | | ||| || || | ||||| || |||||||||||||| || || Sbjct 4617 GACCTGCGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCGAG 4558 Query 97179 TCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAA 97238 |||||| |||||||| | || || | |||||| || |||| || | || || || Sbjct 4557 TCCCATGTCAGCTGAGCGCTGGTACATCTGACACGACAGCTCGCCGTTGGCGACGTAGAA 4498 Query 97239 CTGACTCAATACATGACAGGGGGGCAACGCCAT-TTTTGGAACATCTAAGACATTCCAAG 97297 ||| | || | ||||| || |||| |||||| | | || | || ||||| | Sbjct 4497 CTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAG-GGTTCCATG 4439 Query 97298 CACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTA 97357 | |||| | || | | |||| ||||||| || | | | | ||| | || | | Sbjct 4438 CCGACATGATGATGCGACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCCA 4379 Query 97358 ATTGATCAACGCCTTCTCCACCATAATTGTGCTT--AAGACCTTGATATTCTGCTCCAAA 97415 || || || || | ||| |||| | || | | | | || || | || ||||| Sbjct 4378 GCTGGTCGACTCCCTGGCCAGAGTAATCG-GCGTGCATGGTCGTG-TACTTGGCACCAAA 4321 Query 97416 ATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACC 97475 || | ||||||||| ||||| || ||||| || || || |||| | || | || ||| Sbjct 4320 GTGGCGCCATTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCGAGACC 4261 Query 97476 AAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCA-CACCAGATGCTG 97534 | | || | || | | |||||||| ||||||||||||| | || | ||| Sbjct 4260 GATGCTCTCCAGGTATTCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGTCCTG 4201 Query 97535 CAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTC 97594 ||| |||| || || || || ||||| ||||||| || |||||| | || || | Sbjct 4200 CAACGTCTTGGC-GTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGCCGC 4142 Query 97595 TCCAAAATAC 97604 ||| ||||| Sbjct 4141 GCCAGAATAC 4132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346688651739200