Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1862 262 8e-65 seq1913 127 4e-24 seq957 91.5 3e-13 >seq1862 Length=4717 Score = 262 bits (290), Expect = 8e-65 Identities = 657/985 (67%), Gaps = 26/985 (3%) Strand=Plus/Plus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || |||||||| | ||||| ||||| ||||| ||||| ||||| ||||| | Sbjct 2219 GACTTTGAGTACGACTACTTTGGCTTCAAGACGCTCGAGAAGTCGTACCTCCTGCGCGTC 2278 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | ||||||| ||| || || ||||| ||| | |||| || |||||||| || ||| Sbjct 2279 GGTGGCAAGGTCGCTGAGCGCCCGCAGCAGATGATTCTGCGCGTCGCTGTCGGCATCCAC 2338 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988 ||| ||||||| || || ||||||||||||| ||| || ||| | || Sbjct 2339 AAGCATGACATCGACGCCGCGCTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACG 2398 Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTT 249047 || || || |||||||| ||||||||||| || | || | |||||| |||||||| Sbjct 2399 CACGCGACGCCGACGCTGTTCAACGCCGGCACGCCTC-GCCCGCAGCTGTCGTCGTGCTT 2457 Query 249048 TCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGC 249107 || || |||||| | |||||||| |||| ||||| ||||||||||| || ||| || Sbjct 2458 CCTGCTCGCCATGAAGGACGACTCGATCGAAGGCATCTATGACACGCTCAAGCAGTGCGC 2517 Query 249108 GAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGG 249167 || || || | || ||||| |||||| || ||| ||||||||| |||| Sbjct 2518 CTGCATCTCCAAGTGGGCCGGCGGCATCGGTGTCAGCGTGCACAACATCCGCGCGACCAA 2577 Query 249168 TTCGTACATCAAAGGTACAAATGGGGTCAGTG-ATGGTATCGTACCCCTCCTTCGATGCT 249226 ||||||||| || ||||| || || | | || |||| ||| | || || | Sbjct 2578 CTCGTACATCCGTGGCACAAA-CGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTGT 2636 Query 249227 TTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCA 249283 | | ||| || | | | | |||| || || || ||||| |||||||| | Sbjct 2637 TCAACGACACGGCGCGTTATGTGGATCAGGGTGGCGGCAAGCGCAAGGGCTCGTTCGCGA 2696 Query 249284 TGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACG 249343 ||||| | || |||||||||||| || || |||||||| ||| | || |||||| ||| Sbjct 2697 TGTATCTCGAGCCGTGGCACGCCGACATCTTCGAGTTCCTCGACCTCAAGAAGAACCACG 2756 Query 249344 GCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCA 249403 |||||||||| | |||||||| || ||||||| ||||| | |||| | |||| Sbjct 2757 GCAACGAGCTGCACCGCGCGCGTGATCTATTCTACGCGATGTGGATTCCCGATCTCTTCA 2816 Query 249404 TGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACC 249463 || ||||| ||||| ||||||| |||| || | | ||| ||| || |||| | Sbjct 2817 TGAAGCGCGTTGAGGCCAACGGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCGCCGGGTC 2876 Query 249464 TC--ATCGATCTACACGGCGCCGACTTCGACCAAGC-CTATA--AGAAATACGAATCCAA 249518 || ||| | || | ||| |||| | || || || | | ||||| | | Sbjct 2877 TCTACACGACGT--GGGGTGACGAGTTCG---AGGCGCTGTACCACCAGTACGAGCGCGA 2931 Query 249519 CGGCATCG---GCAAGACAATCAAGGCTCGGACCCT---TTTTGCGAAGGTGGTGGAGTC 249572 ||| || ||||||| ||| || | | || || |||| | | ||||| Sbjct 2932 GGGCCGCGCGCGCAAGACGATCCGCGCGCAGCAGCTCTGGTTCGCGA---TCCTCGAGTC 2988 Query 249573 CCAGATAGAGACAGGGGGGCCGTATTATTTGTTCAAAGACGCGTGCAACGCCAAGAGTAA 249632 ||||| ||||| || |||||| ||| ||| ||| |||||||| |||| || Sbjct 2989 GCAGATCGAGACGGGCACGCCGTACATGCTGTACAAGGACTCGTGCAACCGCAAGTCGAA 3048 Query 249633 CCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTC 249692 ||| | | | || || || || |||||| || ||||| |||||| | | ||| | Sbjct 3049 CCAGCAGAACCTCGGCACGATTCGCTCGAGCAACCTCTGCTGTGAGGTGCTCGAGTACAC 3108 Query 249693 GTCCAAGGAGGAGATTGCCGTCTGCAACCTGGCAAGCATCAATCTCGTGAGGCACGTGAG 249752 ||| || ||| | || || |||||||| || |||| || || | |||| Sbjct 3109 GTCGCCCGACGAGGTCGCGGTGTGCAACCTCGCGTCCATCGCGCTGTCGAAGTTTGTGAA 3168 Query 249753 GGCGGACAGGACGTTCGACTTCGAG 249777 | |||| ||| ||||||||| || Sbjct 3169 CGACGACAAGACCTTCGACTTCAAG 3193 >seq1913 Length=4630 Score = 127 bits (140), Expect = 4e-24 Identities = 252/368 (68%), Gaps = 10/368 (3%) Strand=Plus/Minus Query 254016 TTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTG 254075 ||| |||| || || || || ||||||||||| || ||| | || | || ||| || Sbjct 2940 TTCTACGGACCCCCTGGCACCGGCAAGACGTCGACGATCGTCGCCGTCGCGCGACAGCTT 2881 Query 254076 TTGGGC---GAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGC 254132 | ||| || || || | ||| | |||||||||||||| || ||||| ||| Sbjct 2880 TACGGCCCCGACTTCCGCAAGAACGGGCGGTTTCTCGAGCTGAACGCCTCGGACGATCGC 2821 Query 254133 GGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGTTC 254192 || | | ||||| ||||| || |||||| ||| | || |||| | | || Sbjct 2820 GGCATCAAGGTCGTGCGCGAGAAAGTCAAGAGCTTCGCGCAGGGCGCGATCA-GCAGCTC 2762 Query 254193 CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCC 254252 ||||| ||||| |||||| || | | ||||||||||| ||| | ||||| | | Sbjct 2761 GT--CCGGCATGCCGCCGTTCAAGATCATCGTGCTGGACGAGGCCGACTCGATGACCGGC 2704 Query 254253 GACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGC 254312 ||||||||||| || || || || | |||||| | ||||| || ||||| || ||| Sbjct 2703 GACGCGCAGTCGGCACTGCGTCGCATGATGGAAAACTACTCCAAGGTCACGCGCTTCTGC 2644 Query 254313 CTGGTGTGCAACTACGT--GTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGT 254370 || | || |||||||| | || | |||||| ||| | || || || || ||||||| Sbjct 2643 CTCATCTGTAACTACGTCAGCCGCA--TCATCGAGCCGATCGCGTCGCGTTGTGCCAAGT 2586 Query 254371 TTCGATTC 254378 |||| ||| Sbjct 2585 TTCGGTTC 2578 >seq957 Length=6759 Score = 91.5 bits (100), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 157243 AACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAG 157302 ||| |||| ||| ||||||| |||| | ||||| || ||||||||||| |||||||| Sbjct 6565 AACGCCGGCCTTCGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAG 6506 Query 157303 AGAAATCATGTCCATCCACTCGAATGGGTT 157332 || |||||||||||||| ||||| ||||| Sbjct 6505 CGAGATCATGTCCATCCAGTCGAACGGGTT 6476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073456027822080