Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1079 122 7e-23 seq5064 118 8e-22 >seq1079 Length=6315 Score = 122 bits (134), Expect = 7e-23 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| ||||||||||| || ||| |||| || || || Sbjct 980 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTG 921 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| || || ||||| | |||||||||||| || || Sbjct 920 CTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTT 861 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | ||||||| | ||| || || | || ||||||||||| || Sbjct 860 CTGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGT 801 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTT 45339 ||||||||| || ||||| ||||| || Sbjct 800 CAGAGTCTTGACGAAGATCTGCATCTT 774 >seq5064 Length=2045 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45135 GCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTT 45194 ||||||| ||||||||| ||||||||||| || ||| |||| || || || | Sbjct 1 GCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCT 60 Query 45195 TTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTT 45254 | |||||||| |||| ||||| || || ||||| | |||||||||||| || || | Sbjct 61 TGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCT 120 Query 45255 GCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCA 45314 |||| || | | ||| ||| ||| || |||| ||| |||||||| ||||| | Sbjct 121 GCTTGACATTGTCAATGCTATCCGAGGGCTCGACGTCCAGGGTGATCGTCTTCCCCGTGA 180 Query 45315 GAGTCTTCACAAAGATTTGCATGTT 45339 | |||||||| ||||| ||||| || Sbjct 181 GGGTCTTCACGAAGATCTGCATTTT 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394966574073760