Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq217 205 8e-48 >seq217 Length=11889 Score = 205 bits (226), Expect = 8e-48 Identities = 430/635 (68%), Gaps = 6/635 (1%) Strand=Plus/Minus Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936 ||||||||| ||| || | |||||||| | | ||||| | | || || || || Sbjct 4739 ATCTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGCACCTTAAGCGGTTCCACA 4680 Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCC 20996 ||||| ||| | ||| || || || | ||||| | |||||||| | ||| || Sbjct 4679 TGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCT 4620 Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 ||||| || ||||| || |||| || |||||||| ||||||||||| || || ||| Sbjct 4619 GTGACCTGCGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCG 4560 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAA 21116 || |||||||| || || | |||||||| ||| || |||||||| || || ||||| Sbjct 4559 AGTCCCATGTCAGCTGAGCGCTGGTACATCTGACACGACAGCTCGCCGTTGGCGACGTAG 4500 Query 21117 AACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCAC 21176 ||||| || || | |||||| || || || |||||| | ||||||||| |||||||| Sbjct 4499 AACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCAT 4440 Query 21177 GCGCACATAACGATGCGCCGATCG--TGGGGCCGCCTGTTAATTAGATCCACCACGTAAC 21234 || |||| | |||||| |||||| |||| || || | | | | | | || | Sbjct 4439 GCCGACATGATGATGCGACGATCGTTTGGGTTCGTCT-TGAGCTTG-TGAATGACCTCCG 4382 Query 21235 GCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAA 21294 ||||||||| || ||||| || ||| | ||||| | |||||| || |||| Sbjct 4381 CCAGCTGGTCGACTCCCTGGCCAGAGTAATCGGCGTGCATGGTCGTGTACTTGGCACCAA 4322 Query 21295 AATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGA-AG 21353 | || | ||| ||||| || ||||| || || |||||||| | || | |||| | Sbjct 4321 AGTGGCGCCATTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCGAGAC 4262 Query 21354 CCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGC 21413 | ||| | ||| | | ||| || | | |||||||| | | ||| | | Sbjct 4261 CGATGC-TCTCCAGGTATTCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGTCC 4203 Query 21414 GACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCC 21473 || ||| || ||| ||| ||||| |||||||||| ||| ||| ||||||| Sbjct 4202 TGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGCCG 4143 Query 21474 CTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAA 21508 | ||| || || | |||||| || | ||| || || Sbjct 4142 CGCCAGAATACGCGTTTGGTCGTCAGCAGCGGGAA 4108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427658382988800