Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq957 163 4e-35 >seq957 Length=6759 Score = 163 bits (180), Expect = 4e-35 Identities = 392/586 (67%), Gaps = 9/586 (2%) Strand=Plus/Minus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || || ||||| |||||||| ||||||||||| | || || ||||| || | Sbjct 6032 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 5973 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || || Sbjct 5972 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGA-GCAGAACGAGCCC 5914 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 || |||||||| || || || || || || || || | | ||| | | ||||| | Sbjct 5913 GAGAAGAAGATGCCCTCGACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGG 5854 Query 50131 -TCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 | || |||||| | ||||| | |||||||| | |||||||| ||||| || Sbjct 5853 CGCGAGTCGCACCACTTGAGCGCCCAGTGCGCCTTCTTCTGCACACAAGGGATCGTCTCG 5794 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 ||||| | || | ||| || || | || || | || || ||||| | || Sbjct 5793 ATGGCGCGGAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGC 5734 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 |||| ||||| || ||||| ||||| || ||||| || |||||||| || | ||| Sbjct 5733 GAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGCGCC 5674 Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCCGT 50365 || | || |||||| || | | || ||||| || | || || || || || || | Sbjct 5673 TCAGGAACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCAT 5616 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT 50425 ||||||| || || ||||| | || || || ||||| | || ||| || || | Sbjct 5615 CACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCATTGTCCGTGAGGT 5556 Query 50426 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 50485 | ||||| || |||| || | | || | |||||| | ||||| || |||| Sbjct 5555 TGTTCCAGTCCTTGAGGTCGTGCACGAGGTCGATCTCTTCCGCCGTCCAGAAGCTCGCCT 5496 Query 50486 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 50531 | ||||| || ||||| | ||||| || | | ||||| ||||| Sbjct 5495 CAGCCTTCTTGTACATCTGCCAGACCTCGTTCTCCTGGATCGGGAA 5450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718066248198400