Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq217 140 2e-28 >seq217 Length=11889 Score = 140 bits (154), Expect = 2e-28 Identities = 374/570 (66%), Gaps = 19/570 (3%) Strand=Plus/Minus Query 25411 CGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGT 25470 ||||||| ||| |||||||| || || | || ||||| ||| || || || | |||| Sbjct 4705 CGAGCTGCACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 4646 Query 25471 GGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGT 25530 ||| || ||||| | ||||| || || | || || | || | || || Sbjct 4645 GGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCGT 4586 Query 25531 AGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGA 25590 |||| ||||||||||| || || |||| ||||||| | | || | |||||| | |||| Sbjct 4585 AGCTCGCGATGTTAAAAGGCACGCCGAGTCCCATGT-CAGCTGAGCGCTGGTACATCTGA 4527 Query 25591 CACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCT 25650 ||||| ||||| ||| | ||||| ||||| || | ||| ||||| || || || Sbjct 4526 CACGACAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGACACGGCGGCAGCGCC 4467 Query 25651 ATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTT- 25709 || | ||| ||||||||| || ||| |||||||| | || | |||||| Sbjct 4466 ATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGTTC 4407 Query 25710 GTC-----CCTG---ATAAGATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAG 25761 ||| | || || | ||||| |||||| || || ||| || ||| Sbjct 4406 GTCTTGAGCTTGTGAATGACCTCCGC---------CAGCTGGTCGACTCCCTGGCCAGAG 4356 Query 25762 TAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACC 25821 || || || |||| |||||||| || || || | | ||| ||||| || ||||| Sbjct 4355 TAATCGGCGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCATTGGAAGCCATACACT 4296 Query 25822 GGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAA 25881 ||||| || || ||| |||| | || | | || | | |||| | || |||| Sbjct 4295 GGTCCGAGATCGCCAGCTTCACGATGTCCGAGACCGATGCTCTCCAGGTATTCCTTGGAT 4236 Query 25882 CCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCT 25941 ||||| | ||||| || | | ||||| || | | |||| ||||||| || Sbjct 4235 CCATTACCATCCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCA 4176 Query 25942 CTGACGAACCACAGCAGCTCCGCCGTGACG 25971 |||| ||||||||||||||| ||| |||| Sbjct 4175 CTGATGAACCACAGCAGCTCTTCCGCGACG 4146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340044079166880