Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq12773 174 2e-39 seq4147 168 1e-37 >seq12773 Length=617 Score = 174 bits (192), Expect = 2e-39 Identities = 203/274 (74%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| |||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 380 CGCTAAGCGTCACCGCAAGGTTCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCTAT 321 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||||||||| || ||||||||| |||| || || |||| || |||| Sbjct 320 CCGCCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCGGGTCTGATCTACGAGGAGAC 261 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| ||||||| ||| ||| |||| || | | ||| || || Sbjct 260 GCGCGGTGTGCTCAAGGTCTTCCTTGAGAACGTCATCCGCGACTCGGTGACCTACACGGA 201 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || ||||| ||||| ||||||| |||| || || | || ||||| || Sbjct 200 GCACGCGCGCCGCAAGACCGTCACGGCCATGGACGTCGTGTACGCGCTCAAGCGTCAGGG 141 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 ||| | | | || ||||| || ||||| | ||| Sbjct 140 CCGCACGCTCTACGGTTTCGGTGGTTAAGCGTCT 107 >seq4147 Length=2525 Score = 168 bits (186), Expect = 1e-37 Identities = 132/158 (84%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||||| |||||| ||||||||||| || ||||||||||| || || Sbjct 159 CGCTAAGCGTCATCGCAAGGTTCTTCGCGATAACATCCAGGGCATCACCAAGCCTGCCAT 100 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| |||||||||||||| ||||||||| ||||||| || |||| || |||| Sbjct 99 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGGCCTGATCTACGAGGAGAC 40 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCC 16589 ||||| ||| | ||| |||||||| ||| ||| |||| Sbjct 39 TCGTGGTGTCCTCAAGGTCTTCCTCGAGAACGTCATCC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79054573234080