Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27]
22,560 sequences; 37,673,126 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq5064 86.0 5e-12
seq1079 84.2 2e-11
>seq5064
Length=2045
Score = 86.0 bits (94), Expect = 5e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 16734 GCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTT 16793
||||||| |||||||| || ||||||||||| | | || | ||||||| | || |
Sbjct 1 GCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCT 60
Query 16794 TGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCT 16853
|||| || | || || ||||| || ||| ||| | ||||| ||||| || | ||
Sbjct 61 TGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCT 120
Query 16854 GCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCA 16913
|||| || | | | | | || |||||| |||| |||||| || || || || |
Sbjct 121 GCTTGACATTGTCAATGCTATCCGAGGGCTCGACGTCCAGGGTGATCGTCTTCCCCGTGA 180
Query 16914 GCGTTTTGACAAAAATCTGCATTTT 16938
| || || || || |||||||||||
Sbjct 181 GGGTCTTCACGAAGATCTGCATTTT 205
>seq1079
Length=6315
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| ||||| |||||||| || ||||||||||| | | || | ||||||| | ||
Sbjct 979 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGC 920
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| || ||| ||| | ||||| ||||| || | |
Sbjct 919 TTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTC 860
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||||| || | | | | |||| ||||| || | ||||| || || ||||||
Sbjct 859 TGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTC 800
Query 16913 AGCGTTTTGACAAAAATCTGCATTTT 16938
|| || ||||| || |||||||| ||
Sbjct 799 AGAGTCTTGACGAAGATCTGCATCTT 774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404976621054400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |