Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq957 129 7e-25 >seq957 Length=6759 Score = 129 bits (142), Expect = 7e-25 Identities = 371/564 (66%), Gaps = 9/564 (2%) Strand=Plus/Minus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || || ||||| |||||||| ||||||||||| | || | ||||| || | Sbjct 6032 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 5973 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || || Sbjct 5972 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGA-GCAGAACGAGCCC 5914 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 || ||||| || || || || || || || || | | | ||| | | |||||| | Sbjct 5913 GAGAAGAAGATGCCCTCGACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGG 5854 Query 32832 -TCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 | || |||||| | ||||| | |||||||| | |||||||| || ||||| Sbjct 5853 CGCGAGTCGCACCACTTGAGCGCCCAGTGCGCCTTCTTCTGCACACAAGGGATCGTCTCG 5794 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || | || | ||| || || | || || | || || || || | || Sbjct 5793 ATGGCGCGGAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGC 5734 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 |||| ||||| || ||||| ||||| || || || || ||||||||||| | ||| Sbjct 5733 GAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGCGCC 5674 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTATTCCGT 33066 || | || ||| || || | | || |||| || | || || || || || || | Sbjct 5673 TCAGGAACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCAT 5616 Query 33067 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 33126 ||||||| || || ||||| | || || || ||||| || || | || || | Sbjct 5615 CACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCATTGTCCGTGAGGT 5556 Query 33127 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186 | ||||| || |||| || | | || | |||||| | ||||| || |||| Sbjct 5555 TGTTCCAGTCCTTGAGGTCGTGCACGAGGTCGATCTCTTCCGCCGTCCAGAAGCTCGCCT 5496 Query 33187 CTGCCTTTTTATACATATTCCAGA 33210 | ||||| || ||||| | ||||| Sbjct 5495 CAGCCTTCTTGTACATCTGCCAGA 5472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633453315776000