Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27]
22,560 sequences; 37,673,126 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1079 118 9e-22
seq5064 104 2e-17
>seq1079
Length=6315
Score = 118 bits (130), Expect = 9e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
||||||||||| || || || || ||| | ||||| || ||| |||| || || || ||
Sbjct 771 GTAAAGATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAG 830
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
| | || | | | ||| || |||| || || || || ||||||||||| || || ||
Sbjct 831 CCTTCGGACAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCG 890
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
||||| || || || || || |||||||| ||| | ||||| |||||| |||| ||
Sbjct 891 GATCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGAC 950
Query 22393 TACAACATTCAAAAAGAATCCAC 22415
|||||||| || || || || ||
Sbjct 951 TACAACATCCAGAAGGAGTCGAC 973
>seq5064
Length=2045
Score = 104 bits (114), Expect = 2e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || || || || || | || || || ||| |||| || || || || ||
Sbjct 205 AAAATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACGATCACCCTGGACGTCGAGCCC 146
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| |||| | | ||| || |||| || || || || ||||||||||| || || || |||
Sbjct 145 TCGGATAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCGGAT 86
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || || || || |||||||| ||| | ||||| |||||| | || || |||
Sbjct 85 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTTTCGGACTAC 26
Query 22396 AACATTCAAAAAGAATCCAC 22415
||||| || || || || ||
Sbjct 25 AACATCCAGAAGGAGTCGAC 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419612595786400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |