Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq217 149 6e-31 >seq217 Length=11889 Score = 149 bits (164), Expect = 6e-31 Identities = 418/636 (66%), Gaps = 7/636 (1%) Strand=Plus/Minus Query 20123 ATCTCCAGGCGCGGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATA 20182 |||| ||| ||| || | || || ||||| ||||||| | || || || | | Sbjct 4739 ATCTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGCACCTTAAGCGGTTCCACA 4680 Query 20183 TGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCA 20242 || | ||||||||| ||||| || | |||||| || || || || | | || || Sbjct 4679 TGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCT 4620 Query 20243 GTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCC 20302 || || || || | | ||| || || | ||||| || ||||||||||| || || Sbjct 4619 GTGACCTGCGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCG 4560 Query 20303 AAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAA 20362 | |||||||| | || | ||| |||| |||||| || ||||| |||| || || || Sbjct 4559 AGTCCCATGTCAGCTGAGCGCTGGTACATCTGACACGACAGCTCGCCGTTGGCGACGTAG 4500 Query 20363 AATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCAC 20422 || || || |||| |||||| ||||| ||||||||| | | |||||| |||||||| Sbjct 4499 AACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCAT 4440 Query 20423 GCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGAC 20482 || |||| ||||| | | ||||| || || | || | | | | | || | Sbjct 4439 GCCGACATGATGATGCGACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCC 4380 Query 20483 AATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAG 20542 | ||||| | |||||||| | || || || | | | | |||| || |||||| Sbjct 4379 AGCTGGTCGACTCCCTGGCCAGAGTAATCGGCGTGCATGGTCGTGTACTTGGCACCAAAG 4320 Query 20543 TGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC--CTCCCTTCTGTGCGCCAGGC 20600 || | ||| ||||| || || || ||||| | ||| || || | ||| || || | Sbjct 4319 TGGCGCCATTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCG--AGAC 4262 Query 20601 CGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA-CTCCTGTTCTT 20659 || | ||||| | ||| |||| ||||| ||||| || | || ||| || | Sbjct 4261 CGATGCTCTCCAGGTATTCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGTCCT 4202 Query 20660 GAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCT 20719 | || | | ||| || || || | | ||||| |||||||||| | | ||||| Sbjct 4201 GCAA-CGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGCCG 4143 Query 20720 CGCCAAAACACCCGCTTTGTGGTTAGTA-AGGGAAA 20754 ||||| || || || || || || || | |||||| Sbjct 4142 CGCCAGAATACGCGTTTGGTCGTCAGCAGCGGGAAA 4107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441248332870400