Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1079 89.7 4e-13 >seq1079 Length=6315 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/226 (69%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || ||||| || || ||||| ||||||||| |||||||| || | | || Sbjct 994 AGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 935 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| || | ||||||||||| || |||||||||||||||||| || | | ||| Sbjct 934 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCC 875 Query 34030 TTGTCCATAATTTTTTGCTT---AATGGAACTCACACTATCAGTAGATTCGCATTCGACC 34086 |||||| || || ||||| | || | | || || | || ||| |||| | Sbjct 874 TTGTCCTGGATCTTCTGCTTGACATTGTCA---ATGCTGTCCGAAGGCTCGACGTCGAGC 818 Query 34087 GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTTA 34132 || || || || ||||| || || || || ||||| ||||| |||| Sbjct 817 GTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATCTTTA 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396953227693120