Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1079 140 8e-28 seq5064 113 1e-19 >seq1079 Length=6315 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||| || || ||||| || ||||| | | Sbjct 1003 CCACCACGAAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 944 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || ||||||||||| ||||| ||| ||| Sbjct 943 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGG 884 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || |||||||| ||| || || || || || || | || || Sbjct 883 ATTCCCTCCTTGTCCTGGATCTTCTGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACG 824 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 823 TCGAGCGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 777 >seq5064 Length=2045 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | |||||||| ||||| || | || || || |||||| Sbjct 12 TCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 71 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| ||| |||||||| || || |||||||| ||| || || || Sbjct 72 ATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGACATTG 131 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || ||| | || || || || |||||||||||||| || || ||||| ||| Sbjct 132 TCAATGCTATCCGAGGGCTCGACGTCCAGGGTGATCGTCTTCCCCGTGAGGGTCTTCACG 191 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 192 AAGATCTGCATT 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179313420895680