Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq3131 98.7 8e-16 >seq3131 Length=3259 Score = 98.7 bits (108), Expect = 8e-16 Identities = 178/258 (69%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 108343 GGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGC-CAC 108401 ||| |||| | |||||||||| || || ||||| | ||| ||||||||| ||| Sbjct 1495 GGGCTCGGCATCACGGCCGGCGCGCACCGCCTGTGGGCGCACCGCAGCTACAAGGCGCAC 1436 Query 108402 CGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCC 108461 ||| ||| | | | ||||| ||| ||| |||| |||| ||| || ||| Sbjct 1435 GGCCTCGTGC-GCTTCTTCCTCATGCTCTGCAACTCGATGGCGAACCAGGGTACGATCTT 1377 Query 108462 GCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACA 108521 || ||| | ||| ||| | || |||||||||||||| |||||| |||| ||||| || Sbjct 1376 CCACTGGTGCCGCGACCACCGCGTGCACCACAAGTACTCGGACACGTCGGCGGACCCGCA 1317 Query 108522 CAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCC 108581 | || | | | || |||| || ||||| |||| ||||| | ||| |||||||| Sbjct 1316 CGACTCGGGCCGCGGCTTCTTCTTTGCGCACATGGGGTGGCTGCTCGTGAAGAAGGACCC 1257 Query 108582 CGACGTGATCTCGGCCGG 108599 ||||||| |||||| Sbjct 1256 ACGCGTGATCGAGGCCGG 1239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381667831568640