Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1862 141 8e-29 >seq1862 Length=4717 Score = 141 bits (156), Expect = 8e-29 Identities = 296/436 (68%), Gaps = 9/436 (2%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 |||||||| || || || || ||| | ||||||||||| | ||| | ||| | Sbjct 2285 AAGGTCGCTGAGCGCCCGCAGCAGATGATTCTGCGCGTCGCTGTCGGCATCCACAAGCAT 2344 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 |||||||| |||| ||| || ||||| | ||||| |||| || |||||||||||| Sbjct 2345 GACATCGACGCCGCGCTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCG 2404 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 | || || ||||| |||||||||| || ||| |||| ||||| || ||||| Sbjct 2405 ACGCCGACGCTGTTCAACGCCGGCACGCCTCGCCCGCAGCTGTCGTCGTGCTTCCTGCTC 2464 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 || || || ||| ||| || |||||||| || | | ||||| | || Sbjct 2465 GCCATGAAGGACGACTCGATCGAAGGCATCTATGACACGCTCAAGCAGTGCGCCTGCATC 2524 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG- 123196 ||||| | | ||||||||| || || | ||||||| || | | | || || || Sbjct 2525 TCCAAGTGGGCCGGCGGCATCGGTGTCAGCGTGCACAACATCCGCG--CGACCAACTCGT 2582 Query 123197 -CATCAGAAGCACCGACGGAATCG-CCTCCGGGCTCGAATCCATGCTGCGAGTTTACAAT 123254 |||| | |||| |||| ||| | ||| |||| |||||||||| || | ||| Sbjct 2583 ACATCCGTGGCACAAACGG-CTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTGTTCAAC 2641 Query 123255 AACGCCGTGCGGCACGTCGACCAG---GGCGGCAAACGCAAAGGCGCGATGGCGATCTAT 123311 || | | ||| | || || ||| |||||||| ||||| ||| || | ||||| ||| Sbjct 2642 GACACGGCGCGTTATGTGGATCAGGGTGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTAT 2701 Query 123312 CTAGAACCGTGGCACG 123327 || || |||||||||| Sbjct 2702 CTCGAGCCGTGGCACG 2717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451875735097600