Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq957 228 8e-55 seq5064 131 2e-25 seq1079 129 6e-25 >seq957 Length=6759 Score = 228 bits (252), Expect = 8e-55 Identities = 439/635 (69%), Gaps = 13/635 (2%) Strand=Plus/Minus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| || ||| || |||||||| || | |||||||| | || ||||| ||||| || Sbjct 6032 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 5973 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | | | ||| ||||| |||||||| || |||||||| || || | | ||| ||||| Sbjct 5972 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCG 5913 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| ||||||||| || ||||| || || | |||||| |||||| ||| | Sbjct 5912 AGAAGAAGATGCCCTCGACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCG-CGG 5854 Query 133067 TGCTGG-CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 || | || ||| |||||||| | ||||| | | || || || ||||| ||| Sbjct 5853 CGCGAGTCGCACCACTTGAGCGCCCAGTGCGCCTTCTTCTGCACACAAGGGATCGTCTCG 5794 Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGA--GGAACGC-ACGTAGGTGTCGATGAGG 133182 |||||| | | || | |||| || | || | | ||| ||||||||||| Sbjct 5793 ATGGCGCGGAGAA---GGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGC 5737 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242 ||| |||| |||||||| | |||||| || || || || |||||||| ||||| ||| Sbjct 5736 AGCGAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGC 5677 Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGC-TCGACCAGATTTTCGTTGACGATGCC 133301 ||||| |||||||| || ||| | ||| | || || |||||||||||||| Sbjct 5676 GCCTCAGGAACCTGCACCTCGCTGCTGAAGTTCATCG-CGAGGTTCTCGTTGACGATGCC 5618 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 || ||||| ||||| || || |||||||||||||| || | |||||| ||||| | | Sbjct 5617 ATCACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCATTGTCCGTGAG 5558 Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGAC-AGGTCCACCTCCTCGACGGTCCAAAACGACG 133420 | | |||||| | | | | || || ||||| | ||| || | ||||| || || Sbjct 5557 GTTGTTCCAGTC-CTTGAGGTCGTGCACGAGGTCGATCTCTTCCGCCGTCCAGAAGCTCG 5499 Query 133421 CCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACC 133480 |||| || || |||||||| ||| | || | || || || || | ||| || | Sbjct 5498 CCTCAGCCTTCTTGTACATCTGCCAGACCTCGTTCTCCTGGATCGGGAAGAGCACGAAAC 5439 Query 133481 GGCGGGGGTTTTCGCGCAACAGCGGCTCC-GCTTG 133514 || ||||| ||| | | | ||||||| ||||| Sbjct 5438 GGTTCGGGTTCTCGAGGAGGAACGGCTCCGGCTTG 5404 >seq5064 Length=2045 Score = 131 bits (144), Expect = 2e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| || || |||||||| || || |||||| | ||||||||| || Sbjct 205 AAAATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACGATCACCCTGGACGTCGAGCCC 146 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || ||| | | | | || | || |||| ||||| |||||||| || | || Sbjct 145 TCGGATAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCGGAT 86 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| ||||| || |||| ||||| || |||||| Sbjct 85 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTTTCGGACTAC 26 Query 38421 AACATCCAAAAGGAAGCGACGCTGC 38445 |||||||| ||||| ||||||||| Sbjct 25 AACATCCAGAAGGAGTCGACGCTGC 1 >seq1079 Length=6315 Score = 129 bits (142), Expect = 6e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| || || || || ||||| || ||||| ||||||||||| | Sbjct 773 AAAGATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAGCC 832 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||||| | | | | || | || |||| ||||| |||||||| || | || Sbjct 833 TTCGGACAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCGGA 892 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| ||||| ||||| || |||| ||||| ||| ||||| Sbjct 893 TCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTA 952 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||||||| || | ||||| || Sbjct 953 CAACATCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCG 991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500031751270400