Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq5064 107 1e-18 seq1079 89.7 3e-13 >seq5064 Length=2045 Score = 107 bits (118), Expect = 1e-18 Identities = 145/201 (72%), Gaps = 12/201 (6%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||||||| | || | || || ||||| || ||||| || Sbjct 12 TCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 71 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGAC---- 34906 || || || ||||| || | || | ||||||||||| |||||||| ||||| Sbjct 72 ATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGACATTG 131 Query 34907 -GGATGCTAT-CGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 ||||||| ||| || ||| || || | ||| || || || |||||||| ||| Sbjct 132 TCAATGCTATCCGA------GGGCTCGACGTCCAGGGTGATCGTCTTCCCCGTGAGGGTC 185 Query 34965 TTCACAAAGATCTGCATATTC 34985 ||||| ||||||||||| ||| Sbjct 186 TTCACGAAGATCTGCATTTTC 206 >seq1079 Length=6315 Score = 89.7 bits (98), Expect = 3e-13 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || | || || ||||| || ||||| || Sbjct 967 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 908 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| |||||||| ||||| || Sbjct 907 ATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGAC--AT 850 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | || || | ||| | ||| || |||| || || || || || || |||||||| Sbjct 849 --TGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTCTT 792 Query 34967 CACAAAGATCTGCATATT 34984 || ||||||||||| || Sbjct 791 GACGAAGATCTGCATCTT 774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324544341991680