Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1703 118 3e-21 seq125 100 8e-16 seq17 91.5 4e-13 >seq1703 Length=4958 Score = 118 bits (130), Expect = 3e-21 Identities = 257/379 (68%), Gaps = 8/379 (2%) Strand=Plus/Minus Query 302490 GTCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTT-ATTTCTTACGG 302548 ||| || || || || || || || |||||||||| | | |||| ||| | |||| Sbjct 4350 GTCCATGCCATCTTCACCATACAAAAACTGAATGATCTCGC-CTTGAGCATTCCGGACGG 4292 Query 302549 TCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAAC 302608 | ||| |||| |||| | ||||| |||| | |||||| || || |||| Sbjct 4291 TACCATCGTAACGTGTCATCACCGACTCCATGGCTTTGACAAGACGACGTTGGATGTAAC 4232 Query 302609 CAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGA 302668 | ||| || || || || || |||||||| | ||| ||||||||||||| || |||| Sbjct 4231 CGGTTTCAGCAGTCTTGACGGCAGTATCAATCAAACCTTCACGACCACCCATGGCGTGGA 4172 Query 302669 AGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCT 302728 |||| | ||||| ||| || ||| | | | ||| | |||||||||||||| || Sbjct 4171 AGAAGAACTCTTGCGGGGTCAGTCCCTTCAAATACGAGTTTTCAACGAAACCACGACTCT 4112 Query 302729 CGGG--CGA-ATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATG 302785 | || ||| ||| || ||| |||| || || || || | | || || | Sbjct 4111 CAGGACCGAGATCATC---CTTTCCGTAGTGAGGAAGAGTTCTTCGGTTGAATCCATAAG 4055 Query 302786 GGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTA 302845 | ||||||||||| || ||||||||||| |||| |||| ||| ||||| || || || | Sbjct 4054 GAATACGCTTTCCTTCGACGTTCTGCTGACCCACACACGCAATAATCTGGGAGATGTTAA 3995 Query 302846 AATCACTGCCCTTGGAGCC 302864 | | |||||||| || Sbjct 3994 TGTAAGATCCCTTGGAACC 3976 >seq125 Length=14182 Score = 100 bits (110), Expect = 8e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 ||||| || |||| ||| || |||||||| || || | ||| |||||||| || || || Sbjct 2187 CCGTGCGAGATCAGACAGTCGCGCTCCATCTCTCCCATACGCAGACCACCTTCTCGCGCA 2246 Query 251548 CTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGC 251607 | |||||| ||||| || || || | || || ||| ||||| || | Sbjct 2247 CGACCCTCCATGGGCTGGCGCGTCAGCATCGTCACGGGGCCGCGCGAGCGCGAGTGGATC 2306 Query 251608 TTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 || || | |||||||||||||||||||||||||| | |||||||||||||| Sbjct 2307 TTGTCGTCGACCATATGCTTGAGACGCTGGTAGAACGTCGGACCGATGAAGAT 2359 >seq17 Length=23322 Score = 91.5 bits (100), Expect = 4e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 354003 CTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTC 354062 ||| || || | ||||| |||||||||||||| || |||||| | || || || || || Sbjct 14688 CTTGATGGCCGAAGCGAGGGCACCAAGCGAGTCGCGATCGAGGTAGTTCGTCGGCTCATC 14629 Query 354063 AAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTG 354122 | || ||| | |||||| | | |||||| || || || || || ||||| |||||||| Sbjct 14628 CATGACAAGGATGTGCGGGTTGAGCCACATGGCAGCGGCAAGGACGACCTTGACCTTCTG 14569 Query 354123 TCCGCCTGATAGTGCGTGAATCTTGGAATATGTACCGAACTGCGATTCAAGGTTGAAATG 354182 || || || || | | || || | |||||||||| | |||| ||| | Sbjct 14568 ACCACCCGAGAGACCACGCATGCGCGAGTGCGTACCGAACTCGGCACCAAGACCGAAGTT 14509 Query 354183 GTCGAGATGTTTCTGTAC 354200 |||||| || ||||| || Sbjct 14508 GTCGAGGTGCTTCTGGAC 14491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471392171122720