Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1862 203 3e-47 seq1079 111 1e-19 seq5064 91.5 1e-13 >seq1862 Length=4717 Score = 203 bits (224), Expect = 3e-47 Identities = 985/1536 (64%), Gaps = 62/1536 (4%) Strand=Plus/Minus Query 138484 TCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAA 138543 || || ||||| || |||| | || | || || || || | || || || ||| Sbjct 3735 TCCTTCATCAGGTACTTGTTCACGATCGTGAACTCGCCTGCAAGCACGCGGCGGTTGTAC 3676 Query 138544 ATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCG 138603 |||||| | ||||| ||||| | ||| |||||||| || || ||||| || || | ||| Sbjct 3675 ATGTTGGTCGTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCGGTAGACGCC 3616 Query 138604 GTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTG 138663 |||||||| ||| | || || || || || | |||| || || | ||||| Sbjct 3615 GTCGGCATCGGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGACGCTGGCCTTG 3556 Query 138664 AGCGACGACCAGTCCCACAAATCGC---TAGGTTTTTTGTTCCACATATCGTACTGTAAC 138720 |||| | ||||||||| | || | || | | |||||| |||||||| || Sbjct 3555 AGCGCGGCCCAGTCCCAGAGGCCGGACGTCGGCGTGACGCCCCACATGTCGTACTGGAAG 3496 Query 138721 ATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAAC 138780 || ||| || | || ||| ||||| |||| || ||| | || | | Sbjct 3495 ATGCCCTTGCTCACAGGTGAGCCCTCGTAGCTGGCGTACGGGCCGTGCTCCTTTGCGAGC 3436 Query 138781 TCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAAT 138840 || | ||||| | ||| || |||| | || ||| || | || |||||| Sbjct 3435 TCCATCGAGGCCTCCATCGCGCCGAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCTCG 3376 Query 138841 CGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGC 138900 ||||||||| ||||||| ||| || | | ||||||| || || || || ||| Sbjct 3375 CGGGCCTCGTCGCTCTCAAACGCGTAGCCCATGAGGATGAACGCATCCGCGAGACCCTGC 3316 Query 138901 ACGCCCACTCCGACAGGGCGATGGCGCAGATTTGA-CGCTTTTGCGGCTTCG---ATAGG 138956 ||||| | |||| ||||| |||||||| || |||| |||| ||| || || Sbjct 3315 ACGCCGATGCCGATCGGGCGGTGGCGCAGGTTGCTTCGCT----CGGCCTCGGGGATCGG 3260 Query 138957 ATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTT 139016 || ||||| | ||||||| ||||| | || ||| ||| ||||| || | | | | Sbjct 3259 GTAGTAGTTGATGTCGATGACCTTGTTGAGGTTGCGCGTGACGACCTTGGTGATGT-CGT 3201 Query 139017 TAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGA 139075 | | | | || ||| | || ||||||||| || ||||| || || Sbjct 3200 ACAGCTTCTTGAAGTCGAAGGTC------TTGTCGTCGT-----TC-ACAAACTTC--GA 3155 Query 139076 CACAA--ATCGAGGCTATGTTGCACACCGCCACTTCGTCGGG-GTCGCTGTATTCGACAA 139132 || || || || | |||||||||||| || |||||||| | || |||| |||| | Sbjct 3154 CAGCGCGATGGACGCGAGGTTGCACACCGCGACCTCGTCGGGCGACG-TGTACTCGAGCA 3096 Query 139133 TTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGT 139192 || || | || || | ||||| || | || || || || || |||| Sbjct 3095 CCTCACAGCAGAGGTTGCTCGAGCGAATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGT 3036 Query 139193 TACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGA 139252 | || | || ||||| ||||| ||||| ||||| || || | || | ||| | || Sbjct 3035 TGCACGAGTCCTTGTACAGCATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCG 2976 Query 139253 ATTTGAACAAGTCC--CTA-GCTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCG 139305 |||| || | || || | || ||| ||| || | | ||||||||| Sbjct 2975 C---GAACCAGAGCTGCTGCGCGCGGATCGTCTTG-CGCGCGC---GGCCCTCGCGCTCG 2923 Query 139306 TACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGG-CGTCAGAAAGATCGCGACACT 139363 |||| | ||| || | ||||| |||| |||| | | ||| | ||| | | || Sbjct 2922 TACTGGTGGTACAGCGCCTCGAACTCGT-CACCCCACGTCGTGT-AGAGACCCGGCGCCT 2865 Query 139364 TGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCG 139423 || || || | || ||| ||||||| |||| |||||| ||||||| ||||| | Sbjct 2864 CGTTCGGGCAGAACAGGCTCCACTCGCCGTTGGCCTCAACGCGCTTCATGAAGAGATCGG 2805 Query 139424 GAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTT-ATCTTCCGAACCCATGTTACGT 139482 ||||||||| ||| | | | ||| ||||| | | || || || || | | | Sbjct 2804 GAATCCACATCGCGTAGAATAGATCACGCGCGCGGTGCAGCT--CGTTGCCGTGGTTCTT 2747 Query 139483 -TTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGC 139541 || | || ||||| || || | ||| |||||||| || || ||||| || || | | Sbjct 2746 CTTGAGGTCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGATACATCGCGAACGA 2687 Query 139542 GCCTTTCCGTTTGCC---ACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAA 139598 ||| || || ||||| ||| ||||| || | || | | | ||||| ||||||| Sbjct 2686 GCCCTTGCGCTTGCCGCCACCCTGATCCACATAACGCGCCGTGTCGTTGAACACGCGCAG 2627 Query 139599 CATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCG 139658 ||| ||| | || ||| ||| | ||||| |||| ||||||| |||| || || Sbjct 2626 CATGGGCACGAGGCCGTTCGACGAGCCGTTTGTGCCACGGATGTACGAGTTGGTCGCGCG 2567 Query 139659 GACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCG 139718 || || || || ||| ||||| |||||| | | ||||| || | |||| | || Sbjct 2566 GATGTTGTGCACGCTGACACCGATGCCGCCGGCCCACTTGGAGATGCAGGCGCACT-GCT 2508 Query 139719 TAAT-GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACG 139777 | | || || || || ||| || |||||||| ||| | || ||| ||||| |||| Sbjct 2507 TGAGCGTGTCATAGATGCCTTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGCACGACG 2448 Query 139778 AAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTT 139837 | || ||||| | ||||||||| ||||| || || ||||||||||||| | Sbjct 2447 ACAGCTGCGGGCGAGGCGTGCCGGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGC 2388 Query 139838 GTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATC--CCTTCCGTGGATACC 139895 || |||||| | |||||||| |||| ||| | || || ||| |||||| || Sbjct 2387 TTTGCGACATGTACTCGTACGTCTCGAGCGCGGCGTCGATGTCATGCTT--GTGGATGCC 2330 Query 139896 GACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAttttttt 139955 ||||| ||| |||| | ||| || || || || || ||| ||| ||| Sbjct 2329 GACAGCGACGCGCAGAATCATCTGCTGCGGGCGCTCAGCGACCTTGCCACCGACGCGCAG 2270 Query 139956 CAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTA 139991 || || ||||| || |||||| |||||||||| Sbjct 2269 GAGGTACGACTTCTCGAGCGTCTTGAAGCCAAAGTA 2234 >seq1079 Length=6315 Score = 111 bits (122), Expect = 1e-19 Identities = 171/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || |||||||| || || | | Sbjct 776 GATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAGCCTTC 835 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||| | || | || || || |||||||| ||||| || ||||| ||||| ||||| Sbjct 836 GGACAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCA 895 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| ||||| || ||||| ||||| | | | || || || || Sbjct 896 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAA 955 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942 ||| || ||||| ||||| || ||| | ||| | || | || || || | | ||||| Sbjct 956 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCGCCTTCGTGGTGGTGCCATCGAGCC 1015 Query 24943 AACG 24946 ||| Sbjct 1016 CACG 1019 >seq5064 Length=2045 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || || | Sbjct 202 ATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACGATCACCCTGGACGTCGAGCCCTCG 143 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | | || | || || || |||||||| ||||| || ||||| ||||| ||||| Sbjct 142 GATAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCAG 83 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||| ||||| | | | || || || ||| Sbjct 82 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTTTCGGACTACAAC 23 Query 24884 ATTCAAAAGGAATCGACACT 24903 || || ||||| ||||| || Sbjct 22 ATCCAGAAGGAGTCGACGCT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449770728876800