Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq5064 129 4e-25 seq1079 104 2e-17 >seq5064 Length=2045 Score = 129 bits (142), Expect = 4e-25 Identities = 148/198 (75%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| | || || || ||||| |||||||| Sbjct 11 CTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 70 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGAC--- 34902 |||||| || ||||| || | || | ||||||||||| | || || || ||||| Sbjct 71 GATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGACATT 130 Query 34903 --GGATGCTAT-CGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGT 34959 ||||||| ||| || |||||| || | ||| || ||||| ||||||||||| Sbjct 131 GTCAATGCTATCCGA------GGGCTCGACGTCCAGGGTGATCGTCTTCCCCGTGAGGGT 184 Query 34960 CTTTACAAAGATCTGCAT 34977 ||| || ||||||||||| Sbjct 185 CTTCACGAAGATCTGCAT 202 >seq1079 Length=6315 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| | || || || ||||| |||||||| Sbjct 968 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 909 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || ||||| || | || | ||||||||||| | || || || ||||| | Sbjct 908 GATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGAC--A 851 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | | || || || | |||||| || | || || ||||| || || || |||| Sbjct 850 T--TGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTCT 793 Query 34962 TTACAAAGATCTGCAT 34977 | || ||||||||||| Sbjct 792 TGACGAAGATCTGCAT 777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325603250764640