Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq217 224 1e-53 >seq217 Length=11889 Score = 224 bits (248), Expect = 1e-53 Identities = 438/637 (69%), Gaps = 10/637 (2%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||||| ||| | ||||| | || ||| | | | | ||||| | || || || ||||| Sbjct 4739 ATCTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGCACCTTAAGCGGTTCCACA 4680 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 ||||| | ||||| |||||| || || | ||||| | ||||| || | || || Sbjct 4679 TGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCT 4620 Query 146992 GTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 || || || || | | || | || | ||||| |||||| || ||||| || || || || Sbjct 4619 GTGACCTGCGCGATGA-GTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCC 4561 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110 || |||||||| | || | |||||||| ||| ||||| ||||| |||| ||| ||||| Sbjct 4560 GAGTCCCATGTCAGCTGAGCGCTGGTACATCTGACACGACAGCTCGCCGTTGGCGACGTA 4501 Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 |||||||| | ||||| ||||||||||||||||| | |||||||| |||||||| Sbjct 4500 GAACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCA 4441 Query 147171 GGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 ||||| | | | || | | || | |||||| |||| | || | || ||| | Sbjct 4440 TGCCGACATGATGATGCGAC-GATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCG 4382 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCA 147288 ||||||||| || |||||||| ||| | | | ||| | | |||| |||| ||| Sbjct 4381 CCAGCTGGTCGACTCCCTGGCCAGAGTA-ATCGGCGTGCATGGTCGTGTACTTGGCACCA 4323 Query 147289 AAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTC--TGTGCGAGA 147346 ||||| | ||| |||||||| |||||||| || || ||||| | | | ||| ||||| Sbjct 4322 AAGTGGCGCCATTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCGAGA 4263 Query 147347 AGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGG 147406 || | || || | || ||| || | | ||||| ||| | |||||| Sbjct 4262 --CCGATGCTCTCCAGGTATTCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGT 4205 Query 147407 CGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCC 147466 | | | ||| | || ||| ||| | ||||||||| |||||||| ||| || | Sbjct 4204 CCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGC 4145 Query 147467 CCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 | | ||| || || | ||||| |||||||| ||||| Sbjct 4144 CGCGCCAGAATACGCGTTTGGTCGTCAGCAGCGGGAA 4108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583323456384000