Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq217 188 6e-43 >seq217 Length=11889 Score = 188 bits (208), Expect = 6e-43 Identities = 387/573 (68%), Gaps = 2/573 (0%) Strand=Plus/Plus Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279 || |||||||||||||| ||||| || | |||| ||||| | || |||||||||||| Sbjct 4108 TTCCCGCTGCTGACGACCAAACGCGTATTCTGGCGCGGCGTCGCGGAAGAGCTGCTGTGG 4167 Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339 ||| | || || | ||| ||| ||||| | | | | ||| | | || ||||| Sbjct 4168 TTCATCAGTGGCGACACAAACGCCAAGACGTTGCAGGACAAGGGCATCCACATTTGGGAT 4227 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCGGGAGGAGGGCGA 34398 | | | || || || | ||||| | || ||| || | ||| || | ||||| Sbjct 4228 GGTAATGGATCCAAGGAATACCTGGAGA-GCATCGGTCTCGGACATCGTGAAGCTGGCGA 4286 Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGA 34458 | || || || || || ||||| ||| | |||||||| || |||| | | | Sbjct 4287 TCTCGGACCAGTGTATGGCTTCCAATGGCGCCACTTTGGTGCCAAGTACACGACCATGCA 4346 Query 34459 AGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCG 34518 || || || || || ||||||| ||||||||| | | || || ||| | ||| Sbjct 4347 CGCCGATTACTCTGGCCAGGGAGTCGACCAGCTGGCGGAGGTCATTCACAAGCTCAAGAC 4406 Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 |||||| | || | | ||| | |||| || |||||||| ||| ||| ||| Sbjct 4407 GAACCCAAACGATCGTCGCATCATCATGTCGGCATGGAACCCTGCGGACCTCAAGGAGAT 4466 Query 34579 GGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTG 34638 |||||| || ||||| |||| ||||||| ||||||||||| || || |||||||| || Sbjct 4467 GGCGCTGCCGCCGTGTCACATGTTCTGCCAGTTCTACGTCGCCAACGGCGAGCTGTCGTG 4526 Query 34639 CCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTA 34698 ||| | || || || || | |||||||| | || ||||| || ||||| || || || Sbjct 4527 TCAGATGTACCAGCGCTCAGCTGACATGGGACTCGGCGTGCCTTTTAACATCGCGAGCTA 4586 Query 34699 CGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCA 34758 ||| ||| | || | ||||| || ||| ||| || | |||| || | | || Sbjct 4587 CGCGCTGTTGACTCGACTCATCGCGCAGGTCACAGGGCTGCGTGCTGGAGACTTCATCCA 4646 Query 34759 TACGTTGGGGGATGCGCATATCTACCTGAACCA 34791 ||| | || |||||||| |||||| ||||||| Sbjct 4647 CACGATCGGCGATGCGCACATCTACTTGAACCA 4679 Score = 188 bits (208), Expect = 6e-43 Identities = 387/573 (68%), Gaps = 2/573 (0%) Strand=Plus/Minus Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613 ||||||| |||||| |||||||| || | ||| || | | || |||| | || ||| Sbjct 4679 TGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCT 4620 Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCT 6673 ||| || ||||| | || | ||| ||||| || || ||||| || ||||| || Sbjct 4619 GTGACCTGCGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCG 4560 Query 6674 AACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAG 6733 | |||||||| | || || || || | ||| || |||||||| || || ||||||||| Sbjct 4559 AGTCCCATGTCAGCTGAGCGCTGGTACATCTGACACGACAGCTCGCCGTTGGCGACGTAG 4500 Query 6734 AATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCAC 6793 || ||||||| |||| ||||| || ||||||||| ||| ||| |||||||| Sbjct 4499 AACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCAT 4440 Query 6794 GCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC 6853 || |||| | ||| | | || | |||||| ||| | ||| || || | | | Sbjct 4439 GCCGACATGATGATGCGACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCC 4380 Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 |||||||| ||||||| || || || || || | | | |||| || |||||| Sbjct 4379 AGCTGGTCGACTCCCTGGCCAGAGTAATCGGCGTGCATGGTCGTGTACTTGGCACCAAAG 4320 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGA-ACCC 6972 || | ||| ||||| || || || || || | ||||| | || ||| | || ||| Sbjct 4319 TGGCGCCATTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCGAGACCG 4260 Query 6973 CCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGA 7032 || | ||||| | || || || | | | ||||| || | | ||| | | Sbjct 4259 ATGC-TCTCCAGGTATTCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGTCCTG 4201 Query 7033 GAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTT 7092 | | ||||| ||| ||| | || || | ||||||||||||||| || | ||||| Sbjct 4200 CAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGCCGCG 4141 Query 7093 CCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125 |||| | || ||||| |||||||||||||| || Sbjct 4140 CCAGAATACGCGTTTGGTCGTCAGCAGCGGGAA 4108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448135990003200