Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq217 163 2e-35 seq4313 82.4 6e-11 >seq217 Length=11889 Score = 163 bits (180), Expect = 2e-35 Identities = 394/602 (65%), Gaps = 7/602 (1%) Strand=Plus/Minus Query 29634 CGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGT 29693 ||||||| | | | ||||||||||| |||| | ||||| ||| ||||| || | |||| Sbjct 4705 CGAGCTGCACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 4646 Query 29694 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 29753 ||| || ||||| | ||||| ||||| || || || | || | || | || Sbjct 4645 GGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCGT 4586 Query 29754 AGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGC 29813 |||| ||||||||||| ||||| ||||| |||||||| |||| | |||||| | ||| | Sbjct 4585 AGCTCGCGATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGAC 4526 Query 29814 ACGAGAGCTCTCCGTCGCTCACGTAAAACTGAC---ACATGGCATGGCACGGAGGAAGGG 29870 |||| ||||| |||| | ||||| ||||| | ||||| || ||||| || || | Sbjct 4525 ACGACAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATG---TGACACGGCGGCAGCG 4469 Query 29871 CCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGT 29930 |||| | ||| |||||||| || ||| ||||||||| | || | ||||| Sbjct 4468 CCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGT 4409 Query 29931 TGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTG 29990 | || ||| || | | | | |||||| || || ||| || ||||| || | Sbjct 4408 TCGTCTTGAGCTTGTGAATGACCTCCGCCAGCTGGTCGACTCCCTGGCCAGAGTAATCGG 4349 Query 29991 NNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCA 30050 | || || | ||| ||||| || ||||| ||||| | Sbjct 4348 CGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCATTGGAAGCCATACACTGGTCCGA 4289 Query 30051 GGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 30110 | || || |||| | || ||| || | | |||| | || |||| || || Sbjct 4288 GATCGCCAGCTTCACGATGTCCGAGACCGATGCTCTCCAGGTATTCCTTGGATCCATTAC 4229 Query 30111 CGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGA 30170 | ||||| || | | ||||| || | | |||| ||||||| || |||| || Sbjct 4228 CATCCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGA 4169 Query 30171 ACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG-GGGA 30229 ||||||||||||| ||| ||||| | ||| || || | |||||||| || || |||| Sbjct 4168 ACCACAGCAGCTCTTCCGCGACGCCGCGCCAGAATACGCGTTTGGTCGTCAGCAGCGGGA 4109 Query 30230 AA 30231 || Sbjct 4108 AA 4107 >seq4313 Length=2415 Score = 82.4 bits (90), Expect = 6e-11 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 53525 CCAGAGATGGGCGACAAGTTT-GCATCCTTCACGGCGCAAAAGGGGACATGCGGAGCGGT 53583 || ||||| ||||||||||| ||| | |||||| || ||||| ||||| || | Sbjct 1585 CCCGAGATCGGCGACAAGTTCAGCAGTCGCCACGGC-CAGAAGGGCGTGTGCGGCACGAT 1643 Query 53584 CCTGACTCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATCA 53642 || | |||||||||||||| ||| || | ||||| || |||||| ||||| ||||| | Sbjct 1644 CCGCAACCAGGAGGACATGCCGTTCAACGACGACGGCGT-GTGCCCGGACCTGATCATGA 1702 Query 53643 ACCCCCACGCCTTTCCCTCCAGGATGACGGT 53673 |||| |||| || || | | |||||||| Sbjct 1703 ACCCGCACGGTTTCCCGAGCCGCATGACGGT 1733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406051525428160