Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq217 203 2e-47 >seq217 Length=11889 Score = 203 bits (224), Expect = 2e-47 Identities = 405/599 (68%), Gaps = 1/599 (0%) Strand=Plus/Minus Query 27128 CGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGT 27187 ||||||| ||| ||||||||||| || | || ||||| ||| || || || | |||| Sbjct 4705 CGAGCTGCACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 4646 Query 27188 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 27247 ||| || ||||| | ||||| ||||| || || || | || | || | || Sbjct 4645 GGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCGT 4586 Query 27248 AGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGAC 27307 |||| ||||||||||| || || ||||| |||||||| | || | |||||| | ||||| Sbjct 4585 AGCTCGCGATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGAC 4526 Query 27308 ACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCA 27367 |||| ||||| || | | ||||| ||||| || | ||| ||||| || || |||| Sbjct 4525 ACGACAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGACACGGCGGCAGCGCCA 4466 Query 27368 TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGT 27427 | | ||| |||||||| || ||| ||||||||| | || | |||||| Sbjct 4465 TCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGTTCG 4406 Query 27428 TCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCC 27487 || ||| || | | | | |||||| || || ||| || ||||| || | Sbjct 4405 TCTTGAGCTTGTGAATGACCTCCGCCAGCTGGTCGACTCCCTGGCCAGAGTAATCGGCGT 4346 Query 27488 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGT 27547 |||| |||||||| || || || || | ||||||||| || ||||| ||||| || | Sbjct 4345 GCATGGTCGTGTACTTGGCACCAAAGTGGCGCCATTGGAAGCCATACACTGGTCCGAGAT 4286 Query 27548 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 | || |||| | || ||| || | | |||| | || |||| || || | | Sbjct 4285 CGCCAGCTTCACGATGTCCGAGACCGATGCTCTCCAGGTATTCCTTGGATCCATTACCAT 4226 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667 |||| || | | ||||| || | | |||| ||||||| || |||| ||||| Sbjct 4225 CCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACC 4166 Query 27668 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG-GGGAAA 27725 |||||||||| ||| ||||| | ||| || || | |||||||| || || |||||| Sbjct 4165 ACAGCAGCTCTTCCGCGACGCCGCGCCAGAATACGCGTTTGGTCGTCAGCAGCGGGAAA 4107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369405603995360